570194


Danio rerio (NCBI)
histoneactivitybindingdemethylasetranscriptionalrepressorrnapolymeraseiisequence-specificdnah-kspecificbloodvesselmorphogenesisnucleusmethyltransferasecomplexproximalpromotertranscriptionregulatoryregionchromatinmethylatedmetalion

Features
Gene ID: 570194
  
Biological name :
  
Synonyms : kdm4c / lysine (K)-specific demethylase 4C / wu:fd55d07|zgc:153957
  
Possible biological names infered from orthology :
  
Species: Danio rerio (NCBI)
  
Chr. number:
Strand:
Band:
Gene start:
Gene end:
  
Corresponding Affymetrix probe sets: Dr.17381.1.A1_at (Zebrafish Array)   
  
Cross references: RefSeq - 139948237
RefSeq - NC_007112.7
RefSeq - NP_001077320.1
RefSeq - NW_018394479.1
RefSeq - NW_018395212.1
RefSeq - NM_001083851.1
  
See co-cited genes in PubMed
Warning: Please see the Ensembl gene model ENSDARG00000061504 to get all the annotations available for this gene.


Gene Ontology (GO)
anatomical structure developmentanatomical structure developmentanatomical structure developmentanatomical structure developmentanatomical structure developmentanatomical structure developmentanatomical structure developmentanatomical structure developmentanatomical structure developmentanatomical structure developmentanatomical structure developmentanatomical structure development
DNA-binding transcription factor activitychromatin bindingdemethylase activitycatalytic activity, acting on a proteinprotein bindingion bindingoxidoreductase activityDNA-binding transcription factor activitychromatin bindingdemethylase activitycatalytic activity, acting on a proteinprotein bindingion bindingoxidoreductase activityDNA-binding transcription factor activitychromatin bindingdemethylase activitycatalytic activity, acting on a proteinprotein bindingion bindingoxidoreductase activityDNA-binding transcription factor activitychromatin bindingdemethylase activitycatalytic activity, acting on a proteinprotein bindingion bindingoxidoreductase activityDNA-binding transcription factor activitychromatin bindingdemethylase activitycatalytic activity, acting on a proteinprotein bindingion bindingoxidoreductase activityDNA-binding transcription factor activitychromatin bindingdemethylase activitycatalytic activity, acting on a proteinprotein bindingion bindingoxidoreductase activityDNA-binding transcription factor activitychromatin bindingdemethylase activitycatalytic activity, acting on a proteinprotein bindingion bindingoxidoreductase activityDNA-binding transcription factor activitychromatin bindingdemethylase activitycatalytic activity, acting on a proteinprotein bindingion bindingoxidoreductase activityDNA-binding transcription factor activitychromatin bindingdemethylase activitycatalytic activity, acting on a proteinprotein bindingion bindingoxidoreductase activityDNA-binding transcription factor activitychromatin bindingdemethylase activitycatalytic activity, acting on a proteinprotein bindingion bindingoxidoreductase activityDNA-binding transcriDNA-binding transcription factor activitychromatin bindingchromatin bindingdemethylase activitydemethylase activitycatalytic activity, catalytic activity, acting on a proteinprotein bindingprotein bindingion bindingion bindingoxidoreductase activoxidoreductase activity
cellorganelleprotein-containing complexmembrane-enclosed lumencellorganelleprotein-containing complexmembrane-enclosed lumencellorganelleprotein-containing complexmembrane-enclosed lumencellorganelleprotein-containing complexmembrane-enclosed lumencellorganelleprotein-containing complexmembrane-enclosed lumencellorganelleprotein-containing complexmembrane-enclosed lumencellorganelleprotein-containing complexmembrane-enclosed lumencellorganelleprotein-containing complexmembrane-enclosed lumencellorganelleprotein-containing complexmembrane-enclosed lumencellorganelleprotein-containing complexmembrane-enclosed lumencellcellorganelleorganelleprotein-containing complexprotein-containing complexmembrane-enclosed lumenmembrane-enclosed lumen
TypeGO IDTermEv.Code
 biological_processGO:0048514 blood vessel morphogenesis IMP
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0035097 histone methyltransferase complex IBA
 molecular_functionGO:0001078 transcriptional repressor activity, RNA polymerase II proximal promoter sequence-specific DNA binding IBA
 molecular_functionGO:0001227 transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific DNA binding IBA
 molecular_functionGO:0003682 chromatin binding IBA
 molecular_functionGO:0032452 histone demethylase activity IBA
 molecular_functionGO:0032454 histone demethylase activity (H3-K9 specific) IBA
 molecular_functionGO:0035064 methylated histone binding IBA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0051864 histone demethylase activity (H3-K36 specific) IBA


Pathways (from Reactome)
Pathway description
No match


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   


© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr