57930


Danio rerio (NCBI)

Features
Gene ID: 57930
  
Biological name :
  
Synonyms : forkhead box H1 / foxh1 / SUR|fast|fast1|fe26b06|schmalspur|wu:fe26b06|wu:fi30c08|wu:fi32b01
  
Possible biological names infered from orthology :
  
Species: Danio rerio (NCBI)
  
Chr. number:
Strand:
Band:
Gene start:
Gene end:
  
Corresponding Affymetrix probe sets: Dr.7743.1.S1_at (Zebrafish Array)   Dr.7743.1.S2_at (Zebrafish Array)   
  
Cross references: RefSeq - 528495564
RefSeq - XP_005156137.1
RefSeq - NC_007123.7
RefSeq - 18858709
RefSeq - NP_571577.1
RefSeq - NM_131502.1
RefSeq - XM_005156080.4
  
See co-cited genes in PubMed
Warning: Please see the Ensembl gene model ENSDARG00000055630 to get all the annotations available for this gene.


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IMP
 biological_processGO:0001568 blood vessel development IMP
 biological_processGO:0001706 endoderm formation IMP
 biological_processGO:0001707 mesoderm formation IMP
 biological_processGO:0001947 heart looping IMP
 biological_processGO:0003143 embryonic heart tube morphogenesis IMP
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IGI
 biological_processGO:0007368 determination of left/right symmetry IMP
 biological_processGO:0009653 anatomical structure morphogenesis IBA
 biological_processGO:0009953 dorsal/ventral pattern formation IMP
 biological_processGO:0010159 specification of animal organ position IMP
 biological_processGO:0010468 regulation of gene expression IMP
 biological_processGO:0014028 notochord formation IMP
 biological_processGO:0021501 prechordal plate formation IMP
 biological_processGO:0021508 floor plate formation IMP
 biological_processGO:0021854 hypothalamus development IMP
 biological_processGO:0030154 cell differentiation IBA
 biological_processGO:0030903 notochord development IMP
 biological_processGO:0032525 somite rostral/caudal axis specification IMP
 biological_processGO:0033504 floor plate development IMP
 biological_processGO:0042074 cell migration involved in gastrulation IMP
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II ISS
 biological_processGO:0046619 optic placode formation involved in camera-type eye formation IMP
 biological_processGO:0048319 axial mesoderm morphogenesis IMP
 biological_processGO:0048327 axial mesodermal cell fate specification IMP
 biological_processGO:0048382 mesendoderm development IGI
 biological_processGO:0048854 brain morphogenesis IMP
 biological_processGO:0060063 Spemann organizer formation at the embryonic shield IMP
 biological_processGO:0060070 canonical Wnt signaling pathway IMP
 biological_processGO:0060971 embryonic heart tube left/right pattern formation IMP
 biological_processGO:0071345 cellular response to cytokine stimulus ISS
 biological_processGO:2000223 regulation of BMP signaling pathway involved in heart jogging IMP
 cellular_componentGO:0000785 chromatin IDA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0000976 transcription regulatory region sequence-specific DNA binding IDA
 molecular_functionGO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding IDA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding IMP
 molecular_functionGO:0001227 transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific DNA binding IDA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IMP
 molecular_functionGO:0046332 SMAD binding IMP


Pathways (from Reactome)
Pathway description
No match


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr