5927


Homo sapiens (NCBI)

Features
Gene ID: 5927
  
Biological name :
  
Synonyms : KDM5A / lysine demethylase 5A / RBBP-2|RBBP2|RBP2
  
Possible biological names infered from orthology :
  
Species: Homo sapiens (NCBI)
  
Chr. number:
Strand:
Band:
Gene start:
Gene end:
  
Corresponding Affymetrix probe sets: 202040_s_at (Human Genome U133 Plus 2.0 Array)   215698_at (Human Genome U133 Plus 2.0 Array)   226367_at (Human Genome U133 Plus 2.0 Array)   226371_at (Human Genome U133 Plus 2.0 Array)   230226_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: RefSeq - 110618244
RefSeq - NC_000012.12
RefSeq - NG_046993.1
RefSeq - NP_001036068.1
RefSeq - NM_001042603.2
RefSeq - NM_005056.2
  
See co-cited genes in PubMed
Warning: Please see the Ensembl gene model ENSG00000073614 to get all the annotations available for this gene.


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IEA
 biological_processGO:0006366 transcription by RNA polymerase II TAS
 biological_processGO:0007283 spermatogenesis IEA
 biological_processGO:0008584 male gonad development IEA
 biological_processGO:0032922 circadian regulation of gene expression ISS
 biological_processGO:0033169 histone H3-K9 demethylation IDA
 biological_processGO:0034720 histone H3-K4 demethylation IDA
 biological_processGO:0034721 histone H3-K4 demethylation, trimethyl-H3-K4-specific IEA
 biological_processGO:0045893 positive regulation of transcription, DNA-templated IDA
 biological_processGO:0051090 regulation of DNA-binding transcription factor activity IMP
 biological_processGO:0055114 oxidation-reduction process IEA
 biological_processGO:1901726 negative regulation of histone deacetylase activity ISS
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0019907 cyclin-dependent protein kinase activating kinase holoenzyme complex IDA
 cellular_componentGO:0032993 protein-DNA complex IEA
 cellular_componentGO:0035097 histone methyltransferase complex IBA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding ISA
 molecular_functionGO:0001046 core promoter sequence-specific DNA binding IMP
 molecular_functionGO:0001227 transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific DNA binding IBA
 molecular_functionGO:0003677 DNA binding IDA
 molecular_functionGO:0003682 chromatin binding IBA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IMP
 molecular_functionGO:0003713 transcription coactivator activity ISS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008270 zinc ion binding IDA
 molecular_functionGO:0031490 chromatin DNA binding IEA
 molecular_functionGO:0032452 histone demethylase activity TAS
 molecular_functionGO:0032454 histone demethylase activity (H3-K9 specific) IDA
 molecular_functionGO:0034647 histone demethylase activity (H3-trimethyl-K4 specific) IDA
 molecular_functionGO:0034648 histone demethylase activity (H3-dimethyl-K4 specific) IDA
 molecular_functionGO:0035064 methylated histone binding IDA
 molecular_functionGO:0042393 histone binding IDA
 molecular_functionGO:0051213 dioxygenase activity IEA


Pathways (from Reactome)
Pathway description
No match


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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