5976


Homo sapiens (NCBI)

Features
Gene ID: 5976
  
Biological name :
  
Synonyms : HUPF1|NORF1|RENT1|pNORF1|smg-2 / UPF1 / UPF1, RNA helicase and ATPase
  
Possible biological names infered from orthology :
  
Species: Homo sapiens (NCBI)
  
Chr. number:
Strand:
Band:
Gene start:
Gene end:
  
Corresponding Affymetrix probe sets: 208947_s_at (Human Genome U133 Plus 2.0 Array)   211168_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: RefSeq - 1034608858
RefSeq - 1034608860
RefSeq - 18375673
RefSeq - 662033888
RefSeq - NC_000019.10
RefSeq - NP_001284478.1
RefSeq - NP_002902.2
RefSeq - XP_016882594.1
RefSeq - XP_016882595.1
RefSeq - NM_001297549.1
RefSeq - NM_002911.3
RefSeq - XM_017027105.2
RefSeq - XM_017027106.2
  
See co-cited genes in PubMed
Warning: Please see the Ensembl gene model ENSG00000005007 to get all the annotations available for this gene.


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay TAS
 biological_processGO:0000294 nuclear-transcribed mRNA catabolic process, endonucleolytic cleavage-dependent decay IMP
 biological_processGO:0000956 nuclear-transcribed mRNA catabolic process IMP
 biological_processGO:0006260 DNA replication IMP
 biological_processGO:0006281 DNA repair IDA
 biological_processGO:0006406 mRNA export from nucleus TAS
 biological_processGO:0006449 regulation of translational termination NAS
 biological_processGO:0009048 dosage compensation by inactivation of X chromosome IEA
 biological_processGO:0032201 telomere maintenance via semi-conservative replication IDA
 biological_processGO:0032204 regulation of telomere maintenance IMP
 biological_processGO:0044770 cell cycle phase transition IMP
 biological_processGO:0061014 positive regulation of mRNA catabolic process IMP
 biological_processGO:0061158 3"-UTR-mediated mRNA destabilization IMP
 biological_processGO:0071044 histone mRNA catabolic process IMP
 biological_processGO:0071222 cellular response to lipopolysaccharide IDA
 biological_processGO:0071347 cellular response to interleukin-1 IDA
 cellular_componentGO:0000784 nuclear chromosome, telomeric region IDA
 cellular_componentGO:0000785 chromatin IDA
 cellular_componentGO:0000932 P-body IEA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005737 cytoplasm NAS
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0035145 exon-exon junction complex IDA
 cellular_componentGO:0044530 supraspliceosomal complex IDA
 molecular_functionGO:0003682 chromatin binding IDA
 molecular_functionGO:0003723 RNA binding NAS
 molecular_functionGO:0004004 ATP-dependent RNA helicase activity IDA
 molecular_functionGO:0004386 helicase activity NAS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0042162 telomeric DNA binding IDA


Pathways (from Reactome)
Pathway description
No match


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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