60642


Danio rerio (NCBI)
developmentdifferentiationtranscriptionregulationrnapolymeraseiidnabindingmorphogenesischondrocyteheartoticformationpancreasactivitysequence-specificepitheliumvalvetypebpancreaticcellproepicardiumdna-templatedcentralnervousmelanocytevesicleendocrine

Features
Gene ID: 60642
  
Biological name :
  
Synonyms : fb18d01|wu:fb18d01 / sox9b / SRY (sex determining region Y)-box 9b
  
Possible biological names infered from orthology :
  
Species: Danio rerio (NCBI)
  
Chr. number:
Strand:
Band:
Gene start:
Gene end:
  
Corresponding Affymetrix probe sets: Dr.11850.1.S1_at (Zebrafish Array)   Dr.11850.1.S2_at (Zebrafish Array)   
  
Cross references: RefSeq - 18859411
RefSeq - NC_007114.7
RefSeq - NP_571719.1
RefSeq - NM_131644.1
  
See co-cited genes in PubMed
Warning: Please see the Ensembl gene model ENSDARG00000043923 to get all the annotations available for this gene.


Gene Ontology (GO)
nitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentcellular developmental processdevelopmental pigmentationnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentcellular developmental processdevelopmental pigmentationnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentcellular developmental processdevelopmental pigmentationnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentcellular developmental processdevelopmental pigmentationnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentcellular developmental processdevelopmental pigmentationnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentcellular developmental processdevelopmental pigmentationnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentcellular developmental processdevelopmental pigmentationnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentcellular developmental processdevelopmental pigmentationnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentcellular developmental processdevelopmental pigmentationnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentcellular developmental processdevelopmental pigmentationnitrogen compoundnitrogen compound metabolic processbiosynthetic procbiosynthetic processcellular metabolicellular metabolic processprimary metabolicprimary metabolic processorganic substanceorganic substance metabolic processanatomical structanatomical structure developmentcellular developmcellular developmental processdevelopmental pigdevelopmental pigmentation
DNA-binding transcription factor activityorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityDNA-binding transcription factor activityorganic cyclic compound bindingorganic cyclic compound bindingheterocyclic compound bindingheterocyclic compound binding
cellorganellecellorganellecellorganellecellorganellecellorganellecellorganellecellorganellecellorganellecellorganellecellorganellecellcellorganelleorganelle
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IBA
 biological_processGO:0002009 morphogenesis of an epithelium IBA
 biological_processGO:0002062 chondrocyte differentiation IBA
 biological_processGO:0003170 heart valve development IMP
 biological_processGO:0003309 type B pancreatic cell differentiation IMP
 biological_processGO:0003342 proepicardium development IMP
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0007417 central nervous system development IBA
 biological_processGO:0007507 heart development IBA
 biological_processGO:0030318 melanocyte differentiation IMP
 biological_processGO:0030916 otic vesicle formation IGI
 biological_processGO:0031016 pancreas development IMP
 biological_processGO:0031018 endocrine pancreas development IMP
 biological_processGO:0031099 regeneration IMP
 biological_processGO:0032332 positive regulation of chondrocyte differentiation IBA
 biological_processGO:0035118 embryonic pectoral fin morphogenesis IMP
 biological_processGO:0043049 otic placode formation IMP
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IBA
 biological_processGO:0048709 oligodendrocyte differentiation IBA
 biological_processGO:0048839 inner ear development IMP
 biological_processGO:0050935 iridophore differentiation IMP
 biological_processGO:0051216 cartilage development IMP
 biological_processGO:0060021 roof of mouth development IMP
 biological_processGO:0060041 retina development in camera-type eye IMP
 biological_processGO:0061008 hepaticobiliary system development IMP
 biological_processGO:0061032 visceral serous pericardium development IMP
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding IEA
 molecular_functionGO:0001228 transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific DNA binding IBA
 molecular_functionGO:0003677 DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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