6474


Homo sapiens (NCBI)
regulationmorphogenesistranscriptionrnapolymeraseiiskeletalembryonicdifferentiationchondrocyteheartmusclesequence-specificdnabindingosteoblastmesenchymalcellproliferationvalvecardiacatriumnervousforelimbsmoothenedsignalingpathwaydigestivetract

Features
Gene ID: 6474
  
Biological name :
  
Synonyms : OG12|OG12X|SHOT / short stature homeobox 2 / SHOX2
  
Possible biological names infered from orthology :
  
Species: Homo sapiens (NCBI)
  
Chr. number:
Strand:
Band:
Gene start:
Gene end:
  
Corresponding Affymetrix probe sets: 208443_x_at (Human Genome U133 Plus 2.0 Array)   210134_x_at (Human Genome U133 Plus 2.0 Array)   210135_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: RefSeq - XP_016862544.1
RefSeq - 1034635123
RefSeq - 1034635126
RefSeq - 254750647
RefSeq - 254750649
RefSeq - 578807661
RefSeq - 578807663
RefSeq - 89145413
RefSeq - NC_000003.12
RefSeq - NG_047079.1
RefSeq - NP_001157150.1
RefSeq - NP_003021.3
RefSeq - NP_006875.2
RefSeq - XP_006713790.1
RefSeq - XP_006713791.1
RefSeq - XP_016862542.1
RefSeq - XP_016862543.1
RefSeq - 1034635121
RefSeq - NM_001163678.1
RefSeq - NM_003030.4
RefSeq - NM_006884.3
RefSeq - XM_017007053.1
RefSeq - XM_017007054.1
RefSeq - XM_017007055.1
RefSeq - XM_006713727.3
RefSeq - XM_006713728.3
  
See co-cited genes in PubMed
Warning: Please see the Ensembl gene model ENSG00000168779 to get all the annotations available for this gene.


Gene Ontology (GO)
nitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentcellular developmental processossificationmesenchymal cell proliferationcell communicationcellular response to stimuluscellular component organizationnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentcellular developmental processossificationmesenchymal cell proliferationcell communicationcellular response to stimuluscellular component organizationnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentcellular developmental processossificationmesenchymal cell proliferationcell communicationcellular response to stimuluscellular component organizationnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentcellular developmental processossificationmesenchymal cell proliferationcell communicationcellular response to stimuluscellular component organizationnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentcellular developmental processossificationmesenchymal cell proliferationcell communicationcellular response to stimuluscellular component organizationnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentcellular developmental processossificationmesenchymal cell proliferationcell communicationcellular response to stimuluscellular component organizationnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentcellular developmental processossificationmesenchymal cell proliferationcell communicationcellular response to stimuluscellular component organizationnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentcellular developmental processossificationmesenchymal cell proliferationcell communicationcellular response to stimuluscellular component organizationnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentcellular developmental processossificationmesenchymal cell proliferationcell communicationcellular response to stimuluscellular component organizationnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentcellular developmental processossificationmesenchymal cell proliferationcell communicationcellular response to stimuluscellular component organizationnitrogen conitrogen compound metabolic processbiosynthetibiosynthetic processcellular mecellular metabolic processprimary metprimary metabolic processorganic suborganic substance metabolic processanatomical anatomical structure developmentcellular decellular developmental processossificatioossificationmesenchymalmesenchymal cell proliferationcell communcell communicationcellular recellular response to stimuluscellular cocellular component organization
DNA-binding transcription factor activityorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityorganic cyclic compound bindingheterocyclic compound bindingDNA-binding transcription factor activityDNA-binding transcription factor activityorganic cyclic compound bindingorganic cyclic compound bindingheterocyclic compound bindingheterocyclic compound binding
cellorganellecellorganellecellorganellecellorganellecellorganellecellorganellecellorganellecellorganellecellorganellecellorganellecellcellorganelleorganelle
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IEA
 biological_processGO:0001501 skeletal system development TAS
 biological_processGO:0001649 osteoblast differentiation IEA
 biological_processGO:0002053 positive regulation of mesenchymal cell proliferation IEA
 biological_processGO:0002063 chondrocyte development IEA
 biological_processGO:0003170 heart valve development IEA
 biological_processGO:0003209 cardiac atrium morphogenesis IEA
 biological_processGO:0007399 nervous system development TAS
 biological_processGO:0007507 heart development TAS
 biological_processGO:0032330 regulation of chondrocyte differentiation IEA
 biological_processGO:0035115 embryonic forelimb morphogenesis IEA
 biological_processGO:0045880 positive regulation of smoothened signaling pathway IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:0048557 embryonic digestive tract morphogenesis IEA
 biological_processGO:0048743 positive regulation of skeletal muscle fiber development IEA
 biological_processGO:0050772 positive regulation of axonogenesis IEA
 biological_processGO:0060272 embryonic skeletal joint morphogenesis IEA
 biological_processGO:0060351 cartilage development involved in endochondral bone morphogenesis IEA
 biological_processGO:0060415 muscle tissue morphogenesis IEA
 biological_processGO:2000172 regulation of branching morphogenesis of a nerve IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding NAS
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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