6556


Homo sapiens (NCBI)

Features
Gene ID: 6556
  
Biological name :
  
Synonyms : LSH|NRAMP|NRAMP1 / SLC11A1 / solute carrier family 11 member 1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens (NCBI)
  
Chr. number:
Strand:
Band:
Gene start:
Gene end:
  
Corresponding Affymetrix probe sets: 1555116_s_at (Human Genome U133 Plus 2.0 Array)   210422_x_at (Human Genome U133 Plus 2.0 Array)   210423_s_at (Human Genome U133 Plus 2.0 Array)   217473_x_at (Human Genome U133 Plus 2.0 Array)   217507_at (Human Genome U133 Plus 2.0 Array)   230382_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: RefSeq - NC_000002.12
RefSeq - NG_012128.1
RefSeq - XP_005246850.1
RefSeq - XP_005246851.1
RefSeq - XP_006712772.1
RefSeq - XP_006712773.1
RefSeq - XP_006712774.1
RefSeq - XP_011509986.1
RefSeq - XP_011509987.1
RefSeq - XP_016860254.1
RefSeq - XP_016860255.1
RefSeq - XP_016860256.1
RefSeq - 1034616081
RefSeq - 1034616079
RefSeq - 1034616089
RefSeq - NP_000569.3
RefSeq - 109255241
RefSeq - 530370836
RefSeq - 530370838
RefSeq - 578804797
RefSeq - 578804799
RefSeq - 578804802
RefSeq - 767919382
RefSeq - 767919384
RefSeq - XR_427108.4
RefSeq - NM_000578.3
RefSeq - NM_001032220.1
RefSeq - XM_005246793.4
RefSeq - XM_005246794.4
RefSeq - XM_006712709.4
RefSeq - XM_006712710.4
RefSeq - XM_006712711.4
RefSeq - XM_011511684.3
RefSeq - XM_011511685.3
RefSeq - XM_017004765.2
RefSeq - XM_017004766.2
RefSeq - XM_017004767.2
RefSeq - XR_427107.3
  
See co-cited genes in PubMed
Warning: Please see the Ensembl gene model ENSG00000018280 to get all the annotations available for this gene.


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001818 negative regulation of cytokine production ISS
 biological_processGO:0001819 positive regulation of cytokine production ISS
 biological_processGO:0002309 T cell proliferation involved in immune response ISS
 biological_processGO:0002369 T cell cytokine production ISS
 biological_processGO:0002606 positive regulation of dendritic cell antigen processing and presentation ISS
 biological_processGO:0002827 positive regulation of T-helper 1 type immune response ISS
 biological_processGO:0006826 iron ion transport IMP
 biological_processGO:0006828 manganese ion transport ISS
 biological_processGO:0006876 cellular cadmium ion homeostasis IGI
 biological_processGO:0006879 cellular iron ion homeostasis IMP
 biological_processGO:0006909 phagocytosis ISS
 biological_processGO:0006954 inflammatory response ISS
 biological_processGO:0007035 vacuolar acidification ISS
 biological_processGO:0009617 response to bacterium IDA
 biological_processGO:0010628 positive regulation of gene expression ISS
 biological_processGO:0015707 nitrite transport ISS
 biological_processGO:0019730 antimicrobial humoral response TAS
 biological_processGO:0032147 activation of protein kinase activity ISS
 biological_processGO:0032496 response to lipopolysaccharide ISS
 biological_processGO:0032623 interleukin-2 production ISS
 biological_processGO:0032632 interleukin-3 production ISS
 biological_processGO:0032729 positive regulation of interferon-gamma production ISS
 biological_processGO:0034341 response to interferon-gamma ISS
 biological_processGO:0042060 wound healing ISS
 biological_processGO:0042116 macrophage activation ISS
 biological_processGO:0042742 defense response to bacterium ISS
 biological_processGO:0042832 defense response to protozoan ISS
 biological_processGO:0043312 neutrophil degranulation TAS
 biological_processGO:0045342 MHC class II biosynthetic process ISS
 biological_processGO:0045454 cell redox homeostasis TAS
 biological_processGO:0045730 respiratory burst ISS
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II ISS
 biological_processGO:0048002 antigen processing and presentation of peptide antigen ISS
 biological_processGO:0048255 mRNA stabilization ISS
 biological_processGO:0050766 positive regulation of phagocytosis ISS
 biological_processGO:0050829 defense response to Gram-negative bacterium ISS
 biological_processGO:0055072 iron ion homeostasis ISS
 biological_processGO:0060586 multicellular organismal iron ion homeostasis ISS
 biological_processGO:0070574 cadmium ion transmembrane transport IGI
 biological_processGO:0070839 divalent metal ion export ISS
 biological_processGO:0071421 manganese ion transmembrane transport IEA
 biological_processGO:1902023 L-arginine transport IEA
 cellular_componentGO:0005764 lysosome ISS
 cellular_componentGO:0005770 late endosome ISS
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0005887 integral component of plasma membrane NAS
 cellular_componentGO:0030670 phagocytic vesicle membrane IDA
 cellular_componentGO:0031902 late endosome membrane TAS
 cellular_componentGO:0070821 tertiary granule membrane TAS
 cellular_componentGO:0101003 ficolin-1-rich granule membrane TAS
 molecular_functionGO:0005384 manganese ion transmembrane transporter activity ISS
 molecular_functionGO:0042803 protein homodimerization activity IDA
 molecular_functionGO:0046915 transition metal ion transmembrane transporter activity IGI
 molecular_functionGO:0051139 metal ion:proton antiporter activity TAS


Pathways (from Reactome)
Pathway description
No match


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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