6830


Homo sapiens (NCBI)

Features
Gene ID: 6830
  
Biological name :
  
Synonyms : SPT6 homolog, histone chaperone / SPT6|SPT6H|emb-5 / SUPT6H
  
Possible biological names infered from orthology :
  
Species: Homo sapiens (NCBI)
  
Chr. number:
Strand:
Band:
Gene start:
Gene end:
  
Corresponding Affymetrix probe sets: 1554311_a_at (Human Genome U133 Plus 2.0 Array)   208420_x_at (Human Genome U133 Plus 2.0 Array)   208830_s_at (Human Genome U133 Plus 2.0 Array)   208831_x_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: RefSeq - 1002819353
RefSeq - 1034600951
RefSeq - 1034600953
RefSeq - 1034600955
RefSeq - 27597090
RefSeq - NC_000017.11
RefSeq - NP_001307684.1
RefSeq - NP_003161.2
RefSeq - XP_016880467.1
RefSeq - XP_016880468.1
RefSeq - XP_016880469.1
RefSeq - XM_017024979.2
RefSeq - XM_017024980.1
RefSeq - NM_001320755.1
RefSeq - NM_003170.4
RefSeq - XR_001752596.1
RefSeq - XR_001752595.1
RefSeq - XM_017024978.1
  
See co-cited genes in PubMed
Warning: Please see the Ensembl gene model ENSG00000109111 to get all the annotations available for this gene.


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006338 chromatin remodeling NAS
 biological_processGO:0006342 chromatin silencing IBA
 biological_processGO:0006355 regulation of transcription, DNA-templated NAS
 biological_processGO:0006366 transcription by RNA polymerase II TAS
 biological_processGO:0006368 transcription elongation from RNA polymerase II promoter TAS
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0008380 RNA splicing IEA
 biological_processGO:0010793 regulation of mRNA export from nucleus ISS
 biological_processGO:0016032 viral process IEA
 biological_processGO:0032968 positive regulation of transcription elongation from RNA polymerase II promoter IMP
 biological_processGO:0034728 nucleosome organization IBA
 biological_processGO:0042789 mRNA transcription by RNA polymerase II IBA
 biological_processGO:0045191 regulation of isotype switching ISS
 biological_processGO:0050684 regulation of mRNA processing ISS
 biological_processGO:0051028 mRNA transport IEA
 biological_processGO:0051147 regulation of muscle cell differentiation ISS
 biological_processGO:0061086 negative regulation of histone H3-K27 methylation IMP
 biological_processGO:0070827 chromatin maintenance IBA
 cellular_componentGO:0005634 nucleus NAS
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0008023 transcription elongation factor complex IBA
 cellular_componentGO:0035327 transcriptionally active chromatin IBA
 molecular_functionGO:0000991 transcription factor activity, core RNA polymerase II binding IBA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity TAS
 molecular_functionGO:0003723 RNA binding HDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0031491 nucleosome binding IBA
 molecular_functionGO:0042393 histone binding IDA


Pathways (from Reactome)
Pathway description
No match


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr