6872


Homo sapiens (NCBI)

Features
Gene ID: 6872
  
Biological name :
  
Synonyms : BA2R|CCG1|CCGS|DYT3|DYT3/TAF1|KAT4|MRXS33|N-TAF1|NSCL2|OF|P250|TAF(II)250|TAF2A|TAFII-250|TAFII250|XDP / TAF1 / TATA-box binding protein associated factor 1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens (NCBI)
  
Chr. number:
Strand:
Band:
Gene start:
Gene end:
  
Corresponding Affymetrix probe sets: 216711_s_at (Human Genome U133 Plus 2.0 Array)   216955_at (Human Genome U133 Plus 2.0 Array)   227205_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: RefSeq - 530421821
RefSeq - 554503966
RefSeq - NC_000023.11
RefSeq - NG_012771.2
RefSeq - 1370524893
RefSeq - 20357585
RefSeq - 20357588
RefSeq - NP_001273003.1
RefSeq - NP_004597.2
RefSeq - NP_620278.1
RefSeq - 530421809
RefSeq - 530421811
RefSeq - 530421813
RefSeq - XP_005262352.1
RefSeq - XP_005262353.1
RefSeq - XP_005262354.1
RefSeq - XP_005262357.1
RefSeq - XP_024308197.1
RefSeq - XP_024308198.1
RefSeq - 1370524891
RefSeq - XR_938407.1
RefSeq - NM_001286074.1
RefSeq - NM_004606.4
RefSeq - NM_138923.3
RefSeq - NR_104387.1
RefSeq - NR_104388.1
RefSeq - NR_104389.1
RefSeq - NR_104390.1
RefSeq - NR_104391.1
RefSeq - NR_104392.1
RefSeq - NR_104393.1
RefSeq - NR_104394.1
RefSeq - NR_104395.1
RefSeq - NR_104396.1
RefSeq - XM_005262295.1
RefSeq - XM_005262296.1
RefSeq - XM_005262297.4
RefSeq - XM_005262300.2
RefSeq - XM_024452429.1
RefSeq - XM_024452430.1
  
See co-cited genes in PubMed
Warning: Please see the Ensembl gene model ENSG00000147133 to get all the annotations available for this gene.


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000209 protein polyubiquitination IDA
 biological_processGO:0006352 DNA-templated transcription, initiation ISS
 biological_processGO:0006355 regulation of transcription, DNA-templated TAS
 biological_processGO:0006366 transcription by RNA polymerase II TAS
 biological_processGO:0006367 transcription initiation from RNA polymerase II promoter TAS
 biological_processGO:0006468 protein phosphorylation IDA
 biological_processGO:0006511 ubiquitin-dependent protein catabolic process IDA
 biological_processGO:0006974 cellular response to DNA damage stimulus IDA
 biological_processGO:0007049 cell cycle IEA
 biological_processGO:0010629 negative regulation of gene expression IMP
 biological_processGO:0010768 negative regulation of transcription from RNA polymerase II promoter in response to UV-induced DNA damage IMP
 biological_processGO:0016032 viral process IEA
 biological_processGO:0016573 histone acetylation IEA
 biological_processGO:0018105 peptidyl-serine phosphorylation IDA
 biological_processGO:0018107 peptidyl-threonine phosphorylation IDA
 biological_processGO:0030901 midbrain development IGI
 biological_processGO:0032092 positive regulation of protein binding IDA
 biological_processGO:0032436 positive regulation of proteasomal ubiquitin-dependent protein catabolic process IDA
 biological_processGO:0034644 cellular response to UV IDA
 biological_processGO:0036369 transcription factor catabolic process IDA
 biological_processGO:0043433 negative regulation of DNA-binding transcription factor activity IC
 biological_processGO:0045943 positive regulation of transcription by RNA polymerase I IGI
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IGI
 biological_processGO:0046777 protein autophosphorylation TAS
 biological_processGO:0050821 protein stabilization IDA
 biological_processGO:0051123 RNA polymerase II transcriptional preinitiation complex assembly ISS
 biological_processGO:0060260 regulation of transcription initiation from RNA polymerase II promoter NAS
 biological_processGO:0060261 positive regulation of transcription initiation from RNA polymerase II promoter ISS
 biological_processGO:0071318 cellular response to ATP IDA
 biological_processGO:1901796 regulation of signal transduction by p53 class mediator TAS
 biological_processGO:1902806 regulation of cell cycle G1/S phase transition TAS
 biological_processGO:1903026 negative regulation of RNA polymerase II regulatory region sequence-specific DNA binding IDA
 biological_processGO:1905524 negative regulation of protein autoubiquitination IDA
 biological_processGO:2000059 negative regulation of ubiquitin-dependent protein catabolic process IMP
 biological_processGO:2000825 positive regulation of androgen receptor activity IDA
 cellular_componentGO:0000790 nuclear chromatin IDA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0005667 transcription factor complex IPI
 cellular_componentGO:0005669 transcription factor TFIID complex TAS
 cellular_componentGO:0005730 nucleolus IDA
 cellular_componentGO:0071339 MLL1 complex IDA
 molecular_functionGO:0000979 RNA polymerase II core promoter sequence-specific DNA binding IGI
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding ISA
 molecular_functionGO:0001075 transcription factor activity, RNA polymerase II core promoter sequence-specific binding involved in preinitiation complex assembly IBA
 molecular_functionGO:0001129 RNA polymerase II transcription factor activity, TBP-class protein binding, involved in preinitiation complex assembly IBA
 molecular_functionGO:0002039 p53 binding IPI
 molecular_functionGO:0003713 transcription coactivator activity IDA
 molecular_functionGO:0004402 histone acetyltransferase activity NAS
 molecular_functionGO:0004674 protein serine/threonine kinase activity IDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0008134 transcription factor binding IPI
 molecular_functionGO:0016301 kinase activity IDA
 molecular_functionGO:0017025 TBP-class protein binding IPI
 molecular_functionGO:0043565 sequence-specific DNA binding ISS
 molecular_functionGO:0044212 transcription regulatory region DNA binding ISS
 molecular_functionGO:0046982 protein heterodimerization activity IPI
 molecular_functionGO:0061628 H3K27me3 modified histone binding IPI
 molecular_functionGO:0061629 RNA polymerase II sequence-specific DNA-binding transcription factor binding IPI
 molecular_functionGO:0061631 ubiquitin conjugating enzyme activity IDA
 molecular_functionGO:0070577 lysine-acetylated histone binding IDA
 molecular_functionGO:1905502 acetyl-CoA binding IDA


Pathways (from Reactome)
Pathway description
No match


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr