6996


Homo sapiens (NCBI)

Features
Gene ID: 6996
  
Biological name :
  
Synonyms : hTDG / TDG / thymine DNA glycosylase
  
Possible biological names infered from orthology :
  
Species: Homo sapiens (NCBI)
  
Chr. number:
Strand:
Band:
Gene start:
Gene end:
  
Corresponding Affymetrix probe sets: 203742_s_at (Human Genome U133 Plus 2.0 Array)   203743_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: RefSeq - 1391723917
RefSeq - 530400782
RefSeq - 59853162
RefSeq - 767975238
RefSeq - 767975240
RefSeq - NC_000012.12
RefSeq - NP_001350541.1
RefSeq - NP_003202.3
RefSeq - XP_005269182.1
RefSeq - XP_011537016.1
RefSeq - XP_011537017.1
RefSeq - XM_005269125.2
RefSeq - NM_001008411.1
RefSeq - NM_001363612.1
RefSeq - NM_003211.5
RefSeq - XM_011538714.1
RefSeq - XM_011538715.1
  
See co-cited genes in PubMed
Warning: Please see the Ensembl gene model ENSG00000139372 to get all the annotations available for this gene.


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IEA
 biological_processGO:0006284 base-excision repair IDA
 biological_processGO:0006285 base-excision repair, AP site formation IMP
 biological_processGO:0006298 mismatch repair IDA
 biological_processGO:0006325 chromatin organization IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0032091 negative regulation of protein binding IEA
 biological_processGO:0035511 oxidative DNA demethylation TAS
 biological_processGO:0035562 negative regulation of chromatin binding IEA
 biological_processGO:0040029 regulation of gene expression, epigenetic ISS
 biological_processGO:0045008 depyrimidination TAS
 biological_processGO:0045995 regulation of embryonic development ISS
 biological_processGO:0080111 DNA demethylation ISS
 biological_processGO:1902544 regulation of DNA N-glycosylase activity IMP
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0005886 plasma membrane IDA
 cellular_componentGO:0016605 PML body IEA
 molecular_functionGO:0000287 magnesium ion binding IDA
 molecular_functionGO:0003677 DNA binding ISS
 molecular_functionGO:0003684 damaged DNA binding TAS
 molecular_functionGO:0003690 double-stranded DNA binding IDA
 molecular_functionGO:0004844 uracil DNA N-glycosylase activity IDA
 molecular_functionGO:0005080 protein kinase C binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0005524 ATP binding IDA
 molecular_functionGO:0008134 transcription factor binding IEA
 molecular_functionGO:0008263 pyrimidine-specific mismatch base pair DNA N-glycosylase activity IMP
 molecular_functionGO:0019104 DNA N-glycosylase activity TAS
 molecular_functionGO:0019904 protein domain specific binding IEA
 molecular_functionGO:0030983 mismatched DNA binding IDA
 molecular_functionGO:0031402 sodium ion binding IDA
 molecular_functionGO:0031404 chloride ion binding IDA
 molecular_functionGO:0032183 SUMO binding IPI
 molecular_functionGO:0042803 protein homodimerization activity IDA
 molecular_functionGO:0043621 protein self-association IDA
 molecular_functionGO:0043739 G/U mismatch-specific uracil-DNA glycosylase activity IMP


Pathways (from Reactome)
Pathway description
No match


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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