71514


Mus musculus (NCBI)
bindingregulationtranscriptionrnadnapolymeraseiimrnasplicingviaimmuneresponsedna-templatedspliceosomerepairinnateprocesscircadianrhythmhistonechromatinregulatoryregionsequence-specificproteinalternativedouble-strandbreakhomologousrecombination

Features
Gene ID: 71514
  
Biological name :
  
Synonyms : 1110004P21Rik|2810416M14Rik|5730453G22Rik|9030402K04Rik|AU021830|D4Ertd314e|Gm12940|PSF|REP1 / Sfpq / splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated)
  
Possible biological names infered from orthology :
  
Species: Mus musculus (NCBI)
  
Chr. number:
Strand:
Band:
Gene start:
Gene end:
  
Corresponding Affymetrix probe sets: 1423795_at (Mouse Genome 430 2.0 Array)   1423796_at (Mouse Genome 430 2.0 Array)   1436898_at (Mouse Genome 430 2.0 Array)   1438458_a_at (Mouse Genome 430 2.0 Array)   1438459_x_at (Mouse Genome 430 2.0 Array)   1439058_at (Mouse Genome 430 2.0 Array)   
  
Cross references: RefSeq - XP_006503469.1
RefSeq - NP_076092.1
RefSeq - NC_000070.6
RefSeq - 568929767
RefSeq - 23956214
RefSeq - XR_001784201.1
RefSeq - XR_867890.1
RefSeq - XR_867891.2
RefSeq - NM_023603.3
RefSeq - NR_045010.1
RefSeq - XM_006503406.3
RefSeq - XR_001784200.1
  
See co-cited genes in PubMed
Warning: Please see the Ensembl gene model ENSMUSG00000028820 to get all the annotations available for this gene.


Gene Ontology (GO)
nitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processresponse to stresscellular response to stimulusimmune responsecircadian rhythmcellular component organizationcell cyclechromosome segregationcell communicationresponse to chemicalcell deathnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processresponse to stresscellular response to stimulusimmune responsecircadian rhythmcellular component organizationcell cyclechromosome segregationcell communicationresponse to chemicalcell deathnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processresponse to stresscellular response to stimulusimmune responsecircadian rhythmcellular component organizationcell cyclechromosome segregationcell communicationresponse to chemicalcell deathnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processresponse to stresscellular response to stimulusimmune responsecircadian rhythmcellular component organizationcell cyclechromosome segregationcell communicationresponse to chemicalcell deathnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processresponse to stresscellular response to stimulusimmune responsecircadian rhythmcellular component organizationcell cyclechromosome segregationcell communicationresponse to chemicalcell deathnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processresponse to stresscellular response to stimulusimmune responsecircadian rhythmcellular component organizationcell cyclechromosome segregationcell communicationresponse to chemicalcell deathnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processresponse to stresscellular response to stimulusimmune responsecircadian rhythmcellular component organizationcell cyclechromosome segregationcell communicationresponse to chemicalcell deathnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processresponse to stresscellular response to stimulusimmune responsecircadian rhythmcellular component organizationcell cyclechromosome segregationcell communicationresponse to chemicalcell deathnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processresponse to stresscellular response to stimulusimmune responsecircadian rhythmcellular component organizationcell cyclechromosome segregationcell communicationresponse to chemicalcell deathnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processresponse to stresscellular response to stimulusimmune responsecircadian rhythmcellular component organizationcell cyclechromosome segregationcell communicationresponse to chemicalcell deathnitrogen nitrogen compound metabolic processbiosynthebiosynthetic processcellular cellular metabolic processprimary mprimary metabolic processorganic sorganic substance metabolic processresponse response to stresscellular cellular response to stimulusimmune reimmune responsecircadiancircadian rhythmcellular cellular component organizationcell cyclcell cyclechromosomchromosome segregationcell commcell communicationresponse response to chemicalcell deatcell death
organic cyclic compound bindingheterocyclic compound bindingchromatin bindingprotein bindingorganic cyclic compound bindingheterocyclic compound bindingchromatin bindingprotein bindingorganic cyclic compound bindingheterocyclic compound bindingchromatin bindingprotein bindingorganic cyclic compound bindingheterocyclic compound bindingchromatin bindingprotein bindingorganic cyclic compound bindingheterocyclic compound bindingchromatin bindingprotein bindingorganic cyclic compound bindingheterocyclic compound bindingchromatin bindingprotein bindingorganic cyclic compound bindingheterocyclic compound bindingchromatin bindingprotein bindingorganic cyclic compound bindingheterocyclic compound bindingchromatin bindingprotein bindingorganic cyclic compound bindingheterocyclic compound bindingchromatin bindingprotein bindingorganic cyclic compound bindingheterocyclic compound bindingchromatin bindingprotein bindingorganic cyclic compound bindingorganic cyclic compound bindingheterocyclic compound bindingheterocyclic compound bindingchromatin bindingchromatin bindingprotein bindingprotein binding
cellorganellemembrane-enclosed lumenprotein-containing complexcellorganellemembrane-enclosed lumenprotein-containing complexcellorganellemembrane-enclosed lumenprotein-containing complexcellorganellemembrane-enclosed lumenprotein-containing complexcellorganellemembrane-enclosed lumenprotein-containing complexcellorganellemembrane-enclosed lumenprotein-containing complexcellorganellemembrane-enclosed lumenprotein-containing complexcellorganellemembrane-enclosed lumenprotein-containing complexcellorganellemembrane-enclosed lumenprotein-containing complexcellorganellemembrane-enclosed lumenprotein-containing complexcellcellorganelleorganellemembrane-enclosed lumenmembrane-enclosed lumenprotein-containing complexprotein-containing complex
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II ISO
 biological_processGO:0000380 alternative mRNA splicing, via spliceosome ISO
 biological_processGO:0000398 mRNA splicing, via spliceosome IBA
 biological_processGO:0000724 double-strand break repair via homologous recombination ISO
 biological_processGO:0002218 activation of innate immune response ISO
 biological_processGO:0002376 immune system process IEA
 biological_processGO:0006281 DNA repair IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0006974 cellular response to DNA damage stimulus IMP
 biological_processGO:0008380 RNA splicing IEA
 biological_processGO:0042752 regulation of circadian rhythm IMP
 biological_processGO:0042754 negative regulation of circadian rhythm IMP
 biological_processGO:0045087 innate immune response IEA
 biological_processGO:0045876 positive regulation of sister chromatid cohesion IMP
 biological_processGO:0045892 negative regulation of transcription, DNA-templated IMP
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II ISO
 biological_processGO:0048511 rhythmic process IEA
 biological_processGO:0051276 chromosome organization IMP
 biological_processGO:0051726 regulation of cell cycle IMP
 biological_processGO:0070932 histone H3 deacetylation IMP
 biological_processGO:1902177 positive regulation of oxidative stress-induced intrinsic apoptotic signaling pathway ISO
 cellular_componentGO:0000785 chromatin ISO
 cellular_componentGO:0005634 nucleus ISO
 cellular_componentGO:0005654 nucleoplasm ISO
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0016363 nuclear matrix ISO
 cellular_componentGO:0042382 paraspeckles ISO
 cellular_componentGO:0090575 RNA polymerase II transcription factor complex IDA
 molecular_functionGO:0000976 transcription regulatory region sequence-specific DNA binding IDA
 molecular_functionGO:0000980 RNA polymerase II distal enhancer sequence-specific DNA binding IDA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding ISO
 molecular_functionGO:0003682 chromatin binding IDA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0042803 protein homodimerization activity ISO
 molecular_functionGO:0042826 histone deacetylase binding ISO
 molecular_functionGO:0044212 transcription regulatory region DNA binding ISO
 molecular_functionGO:0070888 E-box binding IDA


Pathways (from Reactome)
Pathway description
No match


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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