80312


Homo sapiens (NCBI)

Features
Gene ID: 80312
  
Biological name :
  
Synonyms : CXXC6|LCX|bA119F7.1 / TET1 / tet methylcytosine dioxygenase 1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens (NCBI)
  
Chr. number:
Strand:
Band:
Gene start:
Gene end:
  
Corresponding Affymetrix probe sets: 228906_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: RefSeq - NC_000010.11
RefSeq - XP_011538506.1
RefSeq - XP_011538507.1
RefSeq - XP_011538508.1
RefSeq - XP_011538509.1
RefSeq - XP_016872175.1
RefSeq - XP_016872176.1
RefSeq - XP_016872177.1
RefSeq - XP_016872178.1
RefSeq - 1034569673
RefSeq - NP_085128.2
RefSeq - 1034569671
RefSeq - 1034569675
RefSeq - 1034569679
RefSeq - 156139122
RefSeq - 767963887
RefSeq - 767963889
RefSeq - 767963891
RefSeq - 767963893
RefSeq - XR_001747212.1
RefSeq - NM_030625.2
RefSeq - XM_011540204.2
RefSeq - XM_011540205.2
RefSeq - XM_011540206.2
RefSeq - XM_011540207.2
RefSeq - XM_017016686.2
RefSeq - XM_017016687.1
RefSeq - XM_017016688.1
RefSeq - XM_017016689.1
RefSeq - XR_001747210.1
RefSeq - XR_001747211.1
  
See co-cited genes in PubMed
Warning: Please see the Ensembl gene model ENSG00000138336 to get all the annotations available for this gene.


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001826 inner cell mass cell differentiation ISS
 biological_processGO:0006211 5-methylcytosine catabolic process IBA
 biological_processGO:0006325 chromatin organization IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006493 protein O-linked glycosylation ISS
 biological_processGO:0008284 positive regulation of cell proliferation IMP
 biological_processGO:0019827 stem cell population maintenance ISS
 biological_processGO:0031062 positive regulation of histone methylation IMP
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II ISS
 biological_processGO:0055114 oxidation-reduction process IEA
 biological_processGO:0070989 oxidative demethylation IBA
 biological_processGO:0080111 DNA demethylation IMP
 biological_processGO:0090310 negative regulation of methylation-dependent chromatin silencing IMP
 cellular_componentGO:0005634 nucleus IC
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding ISA
 molecular_functionGO:0003677 DNA binding IDA
 molecular_functionGO:0005506 iron ion binding IDA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0070579 methylcytosine dioxygenase activity IMP


Pathways (from Reactome)
Pathway description
No match


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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