85363


Homo sapiens (NCBI)

Features
Gene ID: 85363
  
Biological name :
  
Synonyms : RNF88|TRIM5alpha / TRIM5 / tripartite motif containing 5
  
Possible biological names infered from orthology :
  
Species: Homo sapiens (NCBI)
  
Chr. number:
Strand:
Band:
Gene start:
Gene end:
  
Corresponding Affymetrix probe sets: 210705_s_at (Human Genome U133 Plus 2.0 Array)   223830_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: RefSeq - 767966710
RefSeq - 767966715
RefSeq - NC_000011.10
RefSeq - XP_005253240.1
RefSeq - XP_005253241.1
RefSeq - XP_006718421.1
RefSeq - XP_011518728.1
RefSeq - XP_011518729.1
RefSeq - XP_016873949.1
RefSeq - XP_016873950.1
RefSeq - XP_016873951.1
RefSeq - XP_016873952.1
RefSeq - NG_029122.1
RefSeq - 1034575974
RefSeq - 1034575977
RefSeq - 1034575984
RefSeq - NP_149023.2
RefSeq - NP_149083.2
RefSeq - 1034575971
RefSeq - NP_149084.2
RefSeq - 283046694
RefSeq - 283046696
RefSeq - 283046698
RefSeq - 530395903
RefSeq - 530395905
RefSeq - 578820894
RefSeq - XR_930921.2
RefSeq - NM_033034.2
RefSeq - NM_033092.2
RefSeq - NM_033093.2
RefSeq - XM_005253183.3
RefSeq - XM_005253184.3
RefSeq - XM_006718358.3
RefSeq - XM_011520426.3
RefSeq - XM_011520427.2
RefSeq - XM_017018460.2
RefSeq - XM_017018461.2
RefSeq - XM_017018462.2
RefSeq - XM_017018463.2
RefSeq - XR_001748014.2
RefSeq - XR_001748015.2
RefSeq - XR_001748016.2
RefSeq - XR_001748017.2
RefSeq - XR_001748018.2
RefSeq - XR_930920.3
  
See co-cited genes in PubMed
Warning: Please see the Ensembl gene model ENSG00000132256 to get all the annotations available for this gene.


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002218 activation of innate immune response IDA
 biological_processGO:0002221 pattern recognition receptor signaling pathway IEA
 biological_processGO:0006914 autophagy IDA
 biological_processGO:0016032 viral process IEA
 biological_processGO:0031664 regulation of lipopolysaccharide-mediated signaling pathway IMP
 biological_processGO:0032880 regulation of protein localization IMP
 biological_processGO:0043123 positive regulation of I-kappaB kinase/NF-kappaB signaling IMP
 biological_processGO:0043410 positive regulation of MAPK cascade IMP
 biological_processGO:0045087 innate immune response IDA
 biological_processGO:0046597 negative regulation of viral entry into host cell IDA
 biological_processGO:0051091 positive regulation of DNA-binding transcription factor activity IMP
 biological_processGO:0051092 positive regulation of NF-kappaB transcription factor activity IMP
 biological_processGO:0051607 defense response to virus TAS
 biological_processGO:0060333 interferon-gamma-mediated signaling pathway TAS
 biological_processGO:0070534 protein K63-linked ubiquitination IDA
 biological_processGO:1902187 negative regulation of viral release from host cell IDA
 cellular_componentGO:0000932 P-body IDA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IDA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:1990462 omegasome IDA
 molecular_functionGO:0004842 ubiquitin-protein transferase activity IDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0008329 signaling pattern recognition receptor activity IDA
 molecular_functionGO:0019901 protein kinase binding IPI
 molecular_functionGO:0030674 protein binding, bridging IPI
 molecular_functionGO:0042802 identical protein binding IPI
 molecular_functionGO:0042803 protein homodimerization activity IPI


Pathways (from Reactome)
Pathway description
No match


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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