93840


Mus musculus (NCBI)

Features
Gene ID: 93840
  
Biological name :
  
Synonyms : C530001F03Rik|Lootl|Lp|Lpp1|Ltap|Vang1l2|loop-tail|ska17|ska|stbm|strabismus / Vangl2 / VANGL planar cell polarity 2
  
Possible biological names infered from orthology :
  
Species: Mus musculus (NCBI)
  
Chr. number:
Strand:
Band:
Gene start:
Gene end:
  
Corresponding Affymetrix probe sets: 1419218_at (Mouse Genome 430 2.0 Array)   1436118_at (Mouse Genome 430 2.0 Array)   1455592_at (Mouse Genome 430 2.0 Array)   
  
Cross references: RefSeq - 1039730447
RefSeq - 15723382
RefSeq - 568911289
RefSeq - 568911291
RefSeq - 568911293
RefSeq - 568911295
RefSeq - 568911297
RefSeq - NC_000067.6
RefSeq - NP_277044.1
RefSeq - XP_006497114.1
RefSeq - XP_006497115.1
RefSeq - XP_006497116.1
RefSeq - XP_006497117.1
RefSeq - XP_006497118.1
RefSeq - XP_017168497.1
RefSeq - NM_033509.4
RefSeq - XM_017313008.1
RefSeq - XM_006497051.3
RefSeq - XM_006497052.3
RefSeq - XM_006497053.3
RefSeq - XM_006497054.3
RefSeq - XM_006497055.2
  
See co-cited genes in PubMed
Warning: Please see the Ensembl gene model ENSMUSG00000026556 to get all the annotations available for this gene.


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001569 branching involved in blood vessel morphogenesis TAS
 biological_processGO:0001736 establishment of planar polarity IMP
 biological_processGO:0001843 neural tube closure IMP
 biological_processGO:0001942 hair follicle development IMP
 biological_processGO:0001947 heart looping IMP
 biological_processGO:0003148 outflow tract septum morphogenesis TAS
 biological_processGO:0003149 membranous septum morphogenesis IGI
 biological_processGO:0003150 muscular septum morphogenesis IGI
 biological_processGO:0003347 epicardial cell to mesenchymal cell transition TAS
 biological_processGO:0003402 planar cell polarity pathway involved in axis elongation IGI
 biological_processGO:0007266 Rho protein signal transduction IMP
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0009952 anterior/posterior pattern specification IMP
 biological_processGO:0015012 heparan sulfate proteoglycan biosynthetic process IMP
 biological_processGO:0022007 convergent extension involved in neural plate elongation IMP
 biological_processGO:0030111 regulation of Wnt signaling pathway IMP
 biological_processGO:0032835 glomerulus development IMP
 biological_processGO:0032956 regulation of actin cytoskeleton organization IMP
 biological_processGO:0035019 somatic stem cell population maintenance IMP
 biological_processGO:0035567 non-canonical Wnt signaling pathway IMP
 biological_processGO:0035787 cell migration involved in kidney development IMP
 biological_processGO:0036342 post-anal tail morphogenesis IMP
 biological_processGO:0036514 dopaminergic neuron axon guidance IMP
 biological_processGO:0036515 serotonergic neuron axon guidance IMP
 biological_processGO:0042060 wound healing IGI
 biological_processGO:0043507 positive regulation of JUN kinase activity IGI
 biological_processGO:0045176 apical protein localization IMP
 biological_processGO:0045197 establishment or maintenance of epithelial cell apical/basal polarity IMP
 biological_processGO:0048103 somatic stem cell division IMP
 biological_processGO:0048105 establishment of body hair planar orientation IMP
 biological_processGO:0048546 digestive tract morphogenesis IGI
 biological_processGO:0060028 convergent extension involved in axis elongation IMP
 biological_processGO:0060029 convergent extension involved in organogenesis IGI
 biological_processGO:0060071 Wnt signaling pathway, planar cell polarity pathway IMP
 biological_processGO:0060119 inner ear receptor cell development IGI
 biological_processGO:0060122 inner ear receptor cell stereocilium organization IMP
 biological_processGO:0060488 orthogonal dichotomous subdivision of terminal units involved in lung branching morphogenesis IMP
 biological_processGO:0060489 planar dichotomous subdivision of terminal units involved in lung branching morphogenesis IMP
 biological_processGO:0060490 lateral sprouting involved in lung morphogenesis IMP
 biological_processGO:0060947 cardiac vascular smooth muscle cell differentiation TAS
 biological_processGO:0060993 kidney morphogenesis IMP
 biological_processGO:0061346 planar cell polarity pathway involved in heart morphogenesis IMP
 biological_processGO:0090102 cochlea development IGI
 biological_processGO:0090103 cochlea morphogenesis IMP
 biological_processGO:0090162 establishment of epithelial cell polarity TAS
 biological_processGO:0090175 regulation of establishment of planar polarity IGI
 biological_processGO:0090177 establishment of planar polarity involved in neural tube closure IMP
 biological_processGO:0090179 planar cell polarity pathway involved in neural tube closure IMP
 biological_processGO:1904938 planar cell polarity pathway involved in axon guidance IMP
 biological_processGO:1905515 non-motile cilium assembly IGI
 cellular_componentGO:0001725 stress fiber IDA
 cellular_componentGO:0005886 plasma membrane IDA
 cellular_componentGO:0005911 cell-cell junction IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane ISS
 cellular_componentGO:0016323 basolateral plasma membrane IDA
 cellular_componentGO:0016324 apical plasma membrane IDA
 cellular_componentGO:0016328 lateral plasma membrane IDA
 cellular_componentGO:0030134 COPII-coated ER to Golgi transport vesicle IDA
 cellular_componentGO:0060187 cell pole IDA
 cellular_componentGO:0071944 cell periphery IDA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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