ENSDARG00000000241


Danio rerio

Features
Gene ID: ENSDARG00000000241
  
Biological name :slc40a1
  
Synonyms : slc40a1 / solute carrier family 40 (iron-regulated transporter), member 1
  
Possible biological names infered from orthology : Q9JHI9 / Q9NP59 / solute carrier family 40 member 1
  
Species: Danio rerio
  
Chr. number: 9
Strand: 1
Band:
Gene start: 41103127
Gene end: 41113878
  
Corresponding Affymetrix probe sets: Dr.8152.1.S1_at (Zebrafish Array)   NM_131629_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000000250
NCBI entrez gene - 58153     See in Manteia.
RefSeq - NM_131629
RefSeq Peptide - NP_571704
swissprot - B0V344
ZFIN ID - ZDB-GENE-000511-8
Ensembl - ENSDARG00000000241
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SLC40A1ENSGALG00000043618Gallus gallus
 Q9NP59ENSG00000138449Homo sapiens
 Q9JHI9ENSMUSG00000025993Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:ch211-254p10.2ENSDARG0000005675033


Protein motifs (from Interpro)
Interpro ID Name
 IPR009716  Ferroporti-1
 IPR020846  Major facilitator superfamily domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0034755 iron ion transmembrane transport IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005381 iron ion transmembrane transporter activity IEA


Pathways (from Reactome)
Pathway description
Metal ion SLC transporters
Iron uptake and transport


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000007 blood blood quality , abnormal
Show

 ZFA:0000037 anatomical structure anatomical structure amount , ameliorated
anatomical structure decreased amount , abnormal
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 ZFA:0000107 eye eye decreased pigmentation , abnormal
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 ZFA:0000737 cranium cranium bone mineralization decreased occurrence , abnormal
cranium bone mineralization decreased occurrence , ameliorated
Show

 ZFA:0001069 ventral fin fold ventral fin fold kinked , abnormal
Show

 ZFA:0001115 trunk trunk decreased pigmentation , abnormal
Show

 ZFA:0001189 vertebra vertebra bone mineralization decreased occurrence , abnormal
vertebra bone mineralization decreased occurrence , ameliorated
Show

 ZFA:0001285 intersegmental vessel intersegmental vessel decreased size , abnormal
Show

 ZFA:0001439 anatomical system anatomical system quality , abnormal
Show

 ZFA:0005025 dorsal longitudinal anastomotic vessel dorsal longitudinal anastomotic vessel structure , abnormal
Show

 ZFA:0009044 blood cell blood cell decreased amount , abnormal
Show

 ZFA:0009256 nucleate erythrocyte nucleate erythrocyte decreased amount , abnormal
nucleate erythrocyte low saturation , abnormal
nucleate erythrocyte shape , abnormal
nucleate erythrocyte immature , abnormal
nucleate erythrocyte increased size , abnormal
nucleate erythrocyte nucleus morphology , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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