ENSDARG00000000887


Danio rerio

Features
Gene ID: ENSDARG00000000887
  
Biological name :zgc:56699
  
Synonyms : zgc:56699
  
Possible biological names infered from orthology : gametocyte specific factor 1 / GTSF1 / Q8WW33 / Q9DAN6
  
Species: Danio rerio
  
Chr. number: 23
Strand: 1
Band:
Gene start: 32101202
Gene end: 32107608
  
Corresponding Affymetrix probe sets: Dr.9794.1.S1_at (Zebrafish Array)   NM_212833_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000001807
Ensembl peptide - ENSDARP00000122030
NCBI entrez gene - 405758     See in Manteia.
RefSeq - NM_212833
RefSeq Peptide - NP_997998
swissprot - Q7ZUF8
ZFIN ID - ZDB-GENE-040426-2099
Ensembl - ENSDARG00000000887
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 GTSF1ENSGALG00000001109Gallus gallus
 GTSF1ENSG00000170627Homo sapiens
 Gtsf1ENSMUSG00000022487Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CR382383.2 / GTSF1* / Q8WW33* / gametocyte specific factor 1*ENSDARG0000009958641


Protein motifs (from Interpro)
Interpro ID Name
 IPR013087  Zinc finger C2H2-type
 IPR022776  TRM13/UPF0224 family, U11-48K-like CHHC zinc finger domain
 IPR032844  Protein D7


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005575 cellular_component ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr