ENSMUSG00000022487


Mus musculus

Features
Gene ID: ENSMUSG00000022487
  
Biological name :Gtsf1
  
Synonyms : Gametocyte-specific factor 1 / Gtsf1 / Q9DAN6
  
Possible biological names infered from orthology : Q8WW33
  
Species: Mus musculus
  
Chr. number: 15
Strand: -1
Band: F3
Gene start: 103402405
Gene end: 103430470
  
Corresponding Affymetrix probe sets: 10433145 (MoGene1.0st)   1441836_x_at (Mouse Genome 430 2.0 Array)   1452967_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000116366
Ensembl peptide - ENSMUSP00000122193
Ensembl peptide - ENSMUSP00000120797
Ensembl peptide - ENSMUSP00000119234
Ensembl peptide - ENSMUSP00000023129
Ensembl peptide - ENSMUSP00000114244
Ensembl peptide - ENSMUSP00000114733
Ensembl peptide - ENSMUSP00000115123
Ensembl peptide - ENSMUSP00000115670
NCBI entrez gene - 74174     See in Manteia.
MGI - MGI:1921424
RefSeq - XM_006521491
RefSeq - XM_011245751
RefSeq - XM_011245750
RefSeq - XM_011245749
RefSeq - NM_028797
RefSeq Peptide - NP_083073
swissprot - Q9DAN6
swissprot - D3YWV9
swissprot - F6SXE5
swissprot - D3YUE6
swissprot - D3YV29
Ensembl - ENSMUSG00000022487
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CR382383.2ENSDARG00000099586Danio rerio
 zgc:56699ENSDARG00000000887Danio rerio
 GTSF1ENSGALG00000001109Gallus gallus
 GTSF1ENSG00000170627Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
BC048502ENSMUSG0000005350823
Gtsf1l / Q9CWD0 / Gametocyte-specific factor 1-like / Q9H1H1*ENSMUSG0000007070822


Protein motifs (from Interpro)
Interpro ID Name
 IPR007917  Gametocyte-specific factor 1, vertebrate
 IPR022776  TRM13/UPF0224 family, U11-48K-like CHHC zinc finger domain
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007283 spermatogenesis IEA
 biological_processGO:0030154 cell differentiation IEA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0001147 small testis "reduced size of the male reproductive glands" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:58959]
Show

Allelic Composition: Col10a1tm1.1Rpbh/Col10a1+
Genetic Background: involves: 129/Sv * C57BL/6

 MP:0001925 male infertility "inability of male to produce live offspring" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:60409]
Show

Allelic Composition: Col10a1tm1.1Rpbh/Col10a1+
Genetic Background: involves: 129/Sv * C57BL/6

 MP:0002687 oligozoospermia "reduced concentration of spermatozoa " [pvb:Pierre Vanden Borre , Mouse Genome Informatics Curator, J:57312]
Show

Allelic Composition: Col10a1tm1.1Rpbh/Col10a1+
Genetic Background: involves: 129/Sv * C57BL/6

 MP:0005578 teratozoospermia "presence of malformed spermatozoa in the semen; malformations include the physical bending of the sperm to produce kinks or bends" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, ava:Anna V. Anagnostopoulos , Mouse Genome Informatics Curator]
Show

Allelic Composition: Col10a1tm1.1Rpbh/Col10a1+
Genetic Background: involves: 129/Sv * C57BL/6

 MP:0008261 arrest of male meiosis "cessation of the progression of the process of nuclear division that results in sperm with one half the normal chromosome number of the original cell" [ISBN:0-683-40008-8 "Stedman s Medical Dictionary, 27th edition"]
Show

Allelic Composition: Col10a1tm1.1Rpbh/Col10a1+
Genetic Background: involves: 129/Sv * C57BL/6

 MP:0008280 male germ cell apoptosis "presence of male germs cells that undergo programmed cell death" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Col10a1tm1.1Rpbh/Col10a1+
Genetic Background: involves: 129/Sv * C57BL/6

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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