ENSDARG00000001788


Danio rerio

Features
Gene ID: ENSDARG00000001788
  
Biological name :atp5po
  
Synonyms : atp5po / ATP synthase peripheral stalk subunit OSCP
  
Possible biological names infered from orthology : AP000311.1 / Atp5o / ATP synthase subunit O, mitochondrial / P48047 / Q9DB20
  
Species: Danio rerio
  
Chr. number: 9
Strand: 1
Band:
Gene start: 33145522
Gene end: 33148873
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000003389
NCBI entrez gene - 335191     See in Manteia.
RefSeq - NM_001003843
RefSeq Peptide - NP_001003843
swissprot - Q6DRD1
ZFIN ID - ZDB-GENE-050522-147
Ensembl - ENSDARG00000001788
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000041812Gallus gallus
 AP000311.1ENSG00000249209Homo sapiens
 ATP5POENSG00000241837Homo sapiens
 Atp5oENSMUSG00000022956Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000711  ATPase, OSCP/delta subunit
 IPR026015  F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0015986 ATP synthesis coupled proton transport IEA
 biological_processGO:0099132 ATP hydrolysis coupled cation transmembrane transport IEA
 molecular_functionGO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEA


Pathways (from Reactome)
Pathway description
Formation of ATP by chemiosmotic coupling
Cristae formation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000008 brain brain quality , abnormal
Show

 ZFA:0000029 hindbrain hindbrain quality , abnormal
Show

 ZFA:0000042 midbrain hindbrain boundary midbrain hindbrain boundary quality , abnormal
midbrain hindbrain boundary condensed , abnormal
Show

 ZFA:0000054 pericardium pericardium edematous , abnormal
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 ZFA:0000107 eye eye decreased size , abnormal
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 ZFA:0000110 fourth ventricle fourth ventricle distended , abnormal
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 ZFA:0000112 gut gut quality , abnormal
gut hypoplastic , abnormal
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 ZFA:0000123 liver liver quality , abnormal
liver hypoplastic , abnormal
Show

 ZFA:0001114 head head decreased size , abnormal
Show

 ZFA:0001439 anatomical system anatomical system quality , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000012072 atp5s / ATP synthase, H+ transporting, mitochondrial F0 complex subunit s / Q99766* / Q9CRA7* / ATP synthase subunit s, mitochondrial * / ATP synthase, H+ transporting, mitochondrial Fo com...  / complex / reaction
 ENSDARG00000001788 atp5po / ATP synthase peripheral stalk subunit OSCP / Atp5o* / P48047* / Q9DB20* / AP000311.1* / ATP synthase subunit O, mitochondrial *  / reaction / complex






 

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