ENSDARG00000002131


Danio rerio

Features
Gene ID: ENSDARG00000002131
  
Biological name :celf2
  
Synonyms : celf2 / cugbp, Elav-like family member 2 / Q6P0B1
  
Possible biological names infered from orthology : O95319 / Q9Z0H4
  
Species: Danio rerio
  
Chr. number: 4
Strand: -1
Band:
Gene start: 23886726
Gene end: 24031924
  
Corresponding Affymetrix probe sets: Dr.18261.1.S1_at (Zebrafish Array)   Dr.18269.1.A1_at (Zebrafish Array)   Dr.19056.1.A1_at (Zebrafish Array)   DrAffx.1.42.S1_at (Zebrafish Array)   DrAffx.1.42.S1_s_at (Zebrafish Array)   NM_194401_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000120220
Ensembl peptide - ENSDARP00000122415
Ensembl peptide - ENSDARP00000121792
Ensembl peptide - ENSDARP00000025183
Ensembl peptide - ENSDARP00000072392
Ensembl peptide - ENSDARP00000112156
Ensembl peptide - ENSDARP00000117897
Ensembl peptide - ENSDARP00000118474
NCBI entrez gene - 373117     See in Manteia.
RefSeq - NM_194401
RefSeq Peptide - NP_919382
swissprot - F1QCR6
swissprot - F1QSG1
swissprot - Q4U0V5
swissprot - Q5VSE3
swissprot - Q6P0B1
swissprot - T1ECV3
swissprot - E7FEV4
swissprot - A0A0H2UKD2
ZFIN ID - ZDB-GENE-030826-35
Ensembl - ENSDARG00000002131
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CELF2ENSGALG00000034590Gallus gallus
 CELF2ENSG00000048740Homo sapiens
 Celf2ENSMUSG00000002107Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
celf1 / Q9IBD0 / cugbp, Elav-like family member 1 / P28659* / Q92879*ENSDARG0000000531577
celf4 / Q6DGV1 / CUGBP, Elav-like family member 4ENSDARG0000007004546
celf3a / Q9IBD1 / cugbp, Elav-like family member 3a / CELF3* / Q5SZQ8* / Q8CIN6* / CUGBP Elav-like family member 3* / Mus musculus CUGBP, Elav-like family member 3 (Celf3), transcript varia...ENSDARG0000003466845
celf5a / cugbp, Elav-like family member 5a / CELF5* / Q8N6W0* / CUGBP Elav-like family member 5*ENSDARG0000007137545
celf3b / cugbp, Elav-like family member 3b / CELF3* / Q5SZQ8* / Q8CIN6* / CUGBP Elav-like family member 3* / Mus musculus CUGBP, Elav-like family member 3 (Celf3), transcript variant 8, mRNA.*ENSDARG0000000698342
CELF6 / si:dkey-205h23.2 / Q96J87* / AC009690.3* / CUGBP Elav-like family member 6*ENSDARG0000010193340
celf5b / cugbp, Elav-like family member 5b / CELF5* / Q8N6W0* / CUGBP Elav-like family member 5*ENSDARG0000009072735
CABZ01018956.1 / CELF4* / Q7TSY6* / Q9BZC1* / CUGBP Elav-like family member 4*ENSDARG0000011404915
zgc:165603 / CELF5* / Q8N6W0* / CUGBP Elav-like family member 5*ENSDARG000000987029


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR002343  Paraneoplastic encephalomyelitis antigen
 IPR034196  CELF1/2, RNA recognition motif 1
 IPR034198  CELF1/2, RNA recognition motif 2
 IPR034199  CELF1/2, RNA recognition motif 3


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006397 mRNA processing IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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