ENSDARG00000070045


Danio rerio

Features
Gene ID: ENSDARG00000070045
  
Biological name :celf4
  
Synonyms : celf4 / CUGBP, Elav-like family member 4 / Q6DGV1
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 21
Strand: -1
Band:
Gene start: 12079878
Gene end: 12272543
  
Corresponding Affymetrix probe sets: Dr.16766.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000122295
Ensembl peptide - ENSDARP00000125716
Ensembl peptide - ENSDARP00000075951
NCBI entrez gene - 436835     See in Manteia.
RefSeq - NM_001002562
RefSeq Peptide - NP_001002562
swissprot - F1R292
swissprot - F1QUT6
swissprot - I3IS52
swissprot - Q6DGV1
ZFIN ID - ZDB-GENE-040718-300
Ensembl - ENSDARG00000070045
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
celf5a / cugbp, Elav-like family member 5a / CELF5* / Q8N6W0* / CUGBP Elav-like family member 5*ENSDARG0000007137568
CELF6 / si:dkey-205h23.2 / Q96J87* / AC009690.3* / CUGBP Elav-like family member 6*ENSDARG0000010193365
celf3a / Q9IBD1 / cugbp, Elav-like family member 3a / CELF3* / Q5SZQ8* / Q8CIN6* / CUGBP Elav-like family member 3* / Mus musculus CUGBP, Elav-like family member 3 (Celf3), transcript varia...ENSDARG0000003466862
celf3b / cugbp, Elav-like family member 3b / CELF3* / Q5SZQ8* / Q8CIN6* / CUGBP Elav-like family member 3* / Mus musculus CUGBP, Elav-like family member 3 (Celf3), transcript variant 8, mRNA.*ENSDARG0000000698361
celf5b / cugbp, Elav-like family member 5b / CELF5* / Q8N6W0* / CUGBP Elav-like family member 5*ENSDARG0000009072751
celf1 / Q9IBD0 / cugbp, Elav-like family member 1 / P28659* / Q92879*ENSDARG0000000531544
celf2 / Q6P0B1 / cugbp, Elav-like family member 2 / O95319* / Q9Z0H4*ENSDARG0000000213143
zgc:165603 / CELF5* / Q8N6W0* / CUGBP Elav-like family member 5*ENSDARG0000009870215
CABZ01018956.1 / CELF4* / Q7TSY6* / Q9BZC1* / CUGBP Elav-like family member 4*ENSDARG000001140497


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR034648  CELF-3/4/5/6, RNA recognition motif 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0048026 positive regulation of mRNA splicing, via spliceosome ISS
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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