ENSDARG00000002271


Danio rerio

Features
Gene ID: ENSDARG00000002271
  
Biological name :zfand5b
  
Synonyms : zfand5b / zinc finger, AN1-type domain 5b
  
Possible biological names infered from orthology : O76080 / O88878 / ZFAND5 / zinc finger AN1-type containing 5 / zinc finger, AN1-type domain 5
  
Species: Danio rerio
  
Chr. number: 10
Strand: 1
Band:
Gene start: 15603082
Gene end: 15613302
  
Corresponding Affymetrix probe sets: Dr.6001.1.S1_at (Zebrafish Array)   NM_200949_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000022273
Ensembl peptide - ENSDARP00000146763
NCBI entrez gene - 393923     See in Manteia.
RefSeq - NM_200949
RefSeq Peptide - NP_957243
swissprot - Q7ZU97
ZFIN ID - ZDB-GENE-040426-875
Ensembl - ENSDARG00000002271
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ZFAND5ENSGALG00000015144Gallus gallus
 O76080ENSG00000107372Homo sapiens
 O88878ENSMUSG00000024750Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
zfand5a / zinc finger, AN1-type domain 5a / O88878* / ZFAND5* / O76080* / zinc finger, AN1-type domain 5* / zinc finger AN1-type containing 5*ENSDARG0000001889861
zfand6 / zinc finger, AN1-type domain 6 / Q6FIF0* / Q9DCH6* / zinc finger AN1-type containing 6*ENSDARG0000009844345
zgc:77486ENSDARG0000009397837
zfand4 / zinc finger, AN1-type domain 4 / D3Z3C6* / Q86XD8* / zinc finger AN1-type containing 4*ENSDARG0000007670323


Protein motifs (from Interpro)
Interpro ID Name
 IPR000058  Zinc finger, AN1-type
 IPR002653  Zinc finger, A20-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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