ENSDARG00000098443


Danio rerio

Features
Gene ID: ENSDARG00000098443
  
Biological name :zfand6
  
Synonyms : zfand6 / zinc finger, AN1-type domain 6
  
Possible biological names infered from orthology : Q6FIF0 / Q9DCH6 / zinc finger AN1-type containing 6
  
Species: Danio rerio
  
Chr. number: 7
Strand: 1
Band:
Gene start: 10562118
Gene end: 10583151
  
Corresponding Affymetrix probe sets: Dr.4742.1.S1_at (Zebrafish Array)   NM_205760_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000157049
Ensembl peptide - ENSDARP00000136708
Ensembl peptide - ENSDARP00000142220
Ensembl peptide - ENSDARP00000142502
Ensembl peptide - ENSDARP00000156825
NCBI entrez gene - 336461     See in Manteia.
RefSeq - NM_001328569
RefSeq - NM_001328570
RefSeq - NM_205760
RefSeq Peptide - NP_001315498
RefSeq Peptide - NP_001315499
RefSeq Peptide - NP_991323
swissprot - A0A140LG42
swissprot - Q6PH53
ZFIN ID - ZDB-GENE-030131-8405
Ensembl - ENSDARG00000098443
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ZFAND6ENSGALG00000006505Gallus gallus
 Q6FIF0ENSG00000086666Homo sapiens
 Q9DCH6ENSMUSG00000030629Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
zfand5b / zinc finger, AN1-type domain 5b / O88878* / ZFAND5* / O76080* / zinc finger, AN1-type domain 5* / zinc finger AN1-type containing 5*ENSDARG0000000227141
zfand5a / zinc finger, AN1-type domain 5a / O88878* / ZFAND5* / O76080* / zinc finger, AN1-type domain 5* / zinc finger AN1-type containing 5*ENSDARG0000001889840
zgc:77486ENSDARG0000009397834
zfand4 / zinc finger, AN1-type domain 4 / D3Z3C6* / Q86XD8* / zinc finger AN1-type containing 4*ENSDARG0000007670322


Protein motifs (from Interpro)
Interpro ID Name
 IPR000058  Zinc finger, AN1-type
 IPR002653  Zinc finger, A20-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Peroxisomal protein import


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000071037 pex13 / peroxisomal biogenesis factor 13 / Q92968* / Q9D0K1* / Peroxisomal membrane protein PEX13 *  / reaction / complex
 ENSDARG00000035149 pex12 / peroxisomal biogenesis factor 12 / O00623* / Q8VC48* / Peroxisome assembly protein 12 *  / complex / reaction
 ENSDARG00000041511 pex10 / peroxisomal biogenesis factor 10 / B1AUE5* / O60683* / Peroxisome biosis factor 10 *  / reaction / complex
 ENSDARG00000070654 pex5 / peroxisomal biogenesis factor 5 / O09012* / P50542* / Peroxisomal targeting signal 1 receptor *  / complex / reaction
 ENSDARG00000028322 pex14 / peroxisomal biogenesis factor 14 / O75381* / Q9R0A0* / Peroxisomal membrane protein PEX14 *  / complex / reaction
 ENSDARG00000062421 pex2 / peroxisomal biogenesis factor 2 / P28328*  / complex / reaction
 ENSDARG00000070958 pex6 / peroxisomal biogenesis factor 6 / Q13608* / Q99LC9* / Peroxisome assembly factor 2 *  / complex / reaction






 

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