ENSDARG00000070654


Danio rerio

Features
Gene ID: ENSDARG00000070654
  
Biological name :pex5
  
Synonyms : peroxisomal biogenesis factor 5 / pex5
  
Possible biological names infered from orthology : O09012 / P50542 / Peroxisomal targeting signal 1 receptor
  
Species: Danio rerio
  
Chr. number: 16
Strand: -1
Band:
Gene start: 12064576
Gene end: 12097558
  
Corresponding Affymetrix probe sets: Dr.13800.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000094720
Ensembl peptide - ENSDARP00000117217
Ensembl peptide - ENSDARP00000112065
NCBI entrez gene - 394131     See in Manteia.
RefSeq - NM_201156
RefSeq Peptide - NP_957450
swissprot - E9QCI9
swissprot - E7FGF7
swissprot - Q1MT90
ZFIN ID - ZDB-GENE-040426-981
Ensembl - ENSDARG00000070654
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PEX5ENSGALG00000014683Gallus gallus
 PEX5ENSG00000139197Homo sapiens
 Pex5ENSMUSG00000005069Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
pex5la / peroxisomal biogenesis factor 5-like a / PEX5L* / Q8C437* / Q8IYB4* / PEX5-related protein * / peroxisomal biogenesis factor 5 like*ENSDARG0000002251834
pex5lb / peroxisomal biogenesis factor 5-like b / PEX5L* / Q8IYB4* / peroxisomal biogenesis factor 5 like*ENSDARG0000007440334


Protein motifs (from Interpro)
Interpro ID Name
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR013026  Tetratricopeptide repeat-containing domain
 IPR019734  Tetratricopeptide repeat
 IPR024111  Peroxisomal targeting signal 1 receptor family
 IPR024113  Peroxisomal targeting signal 1 receptor


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016560 protein import into peroxisome matrix, docking IBA
 cellular_componentGO:0005778 peroxisomal membrane IBA
 cellular_componentGO:0005829 cytosol IBA
 molecular_functionGO:0005052 peroxisome matrix targeting signal-1 binding IBA


Pathways (from Reactome)
Pathway description
E3 ubiquitin ligases ubiquitinate target proteins
Peroxisomal protein import


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000004687 acaa1 / acetyl-CoA acyltransferase 1 / Q921H8* / Acaa1a* / Acaa1b* / P09110* / Q8VCH0* / acetyl-Coenzyme A acyltransferase 1B* / acetyl-Coenzyme A acyltransferase 1A*  / complex
 ENSDARG00000071037 pex13 / peroxisomal biogenesis factor 13 / Q92968* / Q9D0K1* / Peroxisomal membrane protein PEX13 *  / complex / reaction
 ENSDARG00000035149 pex12 / peroxisomal biogenesis factor 12 / O00623* / Q8VC48* / Peroxisome assembly protein 12 *  / complex / reaction
 ENSDARG00000038576 ube2d1b / ubiquitin-conjugating enzyme E2D 1b / UBE2D1* / P51668* / P61080* / ubiquitin conjugating enzyme E2 D1*  / reaction / complex
 ENSDARG00000043484 ube2d2 / ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast) / P62838* / P62837* / Ube2d2a* / ubiquitin conjugating enzyme E2 D2* / ubiquitin-conjugating enzyme E2D 2A*  / reaction / complex
 ENSDARG00000041511 pex10 / peroxisomal biogenesis factor 10 / B1AUE5* / O60683* / Peroxisome biosis factor 10 *  / complex / reaction
 ENSDARG00000042821 agps / alkylglycerone phosphate synthase / O00116*  / complex
 ENSDARG00000028322 pex14 / peroxisomal biogenesis factor 14 / O75381* / Q9R0A0* / Peroxisomal membrane protein PEX14 *  / complex / reaction
 ENSDARG00000062421 pex2 / peroxisomal biogenesis factor 2 / P28328*  / reaction / complex
 ENSDARG00000098443 zfand6 / zinc finger, AN1-type domain 6 / Q6FIF0* / Q9DCH6* / zinc finger AN1-type containing 6*  / reaction / complex
 ENSDARG00000070958 pex6 / peroxisomal biogenesis factor 6 / Q13608* / Q99LC9* / Peroxisome assembly factor 2 *  / complex / reaction
 ENSDARG00000086740 phyh / phytanoyl-CoA 2-hydroxylase / O14832* / O35386* / phytanoyl-CoA hydroxylase*  / complex






 

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