ENSDARG00000002758


Danio rerio

Features
Gene ID: ENSDARG00000002758
  
Biological name :dedd1
  
Synonyms : death effector domain-containing 1 / dedd1
  
Possible biological names infered from orthology : death effector domain containing 2 / DEDD2 / DNA-binding death effector domain-containing protein 2 / Q8QZV0 / Q8WXF8
  
Species: Danio rerio
  
Chr. number: 16
Strand: 1
Band:
Gene start: 10841163
Gene end: 10863041
  
Corresponding Affymetrix probe sets: Dr.10244.1.S1_at (Zebrafish Array)   Dr.6208.1.A1_at (Zebrafish Array)   NM_131602_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000065466
Ensembl peptide - ENSDARP00000105333
NCBI entrez gene - 58125     See in Manteia.
RefSeq - NM_131602
RefSeq - XM_017351359
RefSeq Peptide - NP_571677
swissprot - Q6DHV2
swissprot - F1QIL7
ZFIN ID - ZDB-GENE-000616-2
Ensembl - ENSDARG00000002758
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 DEDD2ENSG00000160570Homo sapiens
 Dedd2ENSMUSG00000054499Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
dedd / ugt5e1 / death effector domain containing / O75618* / Q9Z1L3* / Death effector domain-containing protein *ENSDARG0000002978337


Protein motifs (from Interpro)
Interpro ID Name
 IPR001875  Death effector domain
 IPR011029  Death-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008625 extrinsic apoptotic signaling pathway via death domain receptors IBA
 biological_processGO:0042981 regulation of apoptotic process IEA
 cellular_componentGO:0005730 nucleolus IBA
 molecular_functionGO:0003677 DNA binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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