ENSDARG00000003077


Danio rerio

Features
Gene ID: ENSDARG00000003077
  
Biological name :si:ch73-111m19.2
  
Synonyms : si:ch73-111m19.2
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 12
Strand: 1
Band:
Gene start: 45676667
Gene end: 45688953
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000026046
Ensembl peptide - ENSDARP00000127201
Ensembl peptide - ENSDARP00000127380
NCBI entrez gene - 794084     See in Manteia.
RefSeq - NM_001354174
RefSeq - NM_001327912
RefSeq Peptide - NP_001314841
RefSeq Peptide - NP_001341101
RefSeq Peptide - NP_001341103
swissprot - F1QTD7
swissprot - U3JAW1
ZFIN ID - ZDB-GENE-130603-13
Ensembl - ENSDARG00000003077
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
gpx1a / glutathione peroxidase 1a / GPX2* / P18283* / glutathione peroxidase 2*ENSDARG0000001814649
gpx1b / glutathione peroxidase 1b / GPX2* / P18283* / glutathione peroxidase 2*ENSDARG0000000620744
gpx3 / glutathione peroxidase 3 / GPX6* / GPX5* / P46412* / Q91WR8* / P59796* / O75715* / P21765* / P22352* / glutathione peroxidase 6* / glutathione peroxidase 5* / Epididymal secretory gl...ENSDARG0000004334242
gpx4b / glutathione peroxidase 4b / GPX4* / P36969* / glutathione peroxidase 4*ENSDARG0000007683630
gpx4a / glutathione peroxidase 4aENSDARG0000006847829
gpx7 / glutathione peroxidase 7 / Q96SL4*ENSDARG0000009151126
gpx8 / glutathione peroxidase 8 (putative) / Q8TED1*ENSDARG0000001330223


Protein motifs (from Interpro)
Interpro ID Name
 IPR000889  Glutathione peroxidase
 IPR012336  Thioredoxin-like fold
 IPR029760  Glutathione peroxidase conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006979 response to oxidative stress IEA
 biological_processGO:0055114 oxidation-reduction process IEA
 biological_processGO:0098869 cellular oxidant detoxification IEA
 molecular_functionGO:0004601 peroxidase activity IEA
 molecular_functionGO:0004602 glutathione peroxidase activity IEA
 molecular_functionGO:0016491 oxidoreductase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr