ENSDARG00000003512


Danio rerio

Features
Gene ID: ENSDARG00000003512
  
Biological name :anks1b
  
Synonyms : A5PMU4 / anks1b / ankyrin repeat and sterile alpha motif domain containing 1B
  
Possible biological names infered from orthology : ankyrin repeat and sterile alpha motif domain-containing protein 1B isoform 6 / Q7Z6G8
  
Species: Danio rerio
  
Chr. number: 4
Strand: -1
Band:
Gene start: 17886838
Gene end: 18202291
  
Corresponding Affymetrix probe sets: Dr.11359.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000117040
Ensembl peptide - ENSDARP00000131866
NCBI entrez gene - 565408     See in Manteia.
RefSeq - XM_017355052
RefSeq - XM_021475055
RefSeq Peptide - NP_001093487
swissprot - A5PMU4
swissprot - A0A0R4IE55
ZFIN ID - ZDB-GENE-041210-349
Ensembl - ENSDARG00000003512
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ANKS1BENSGALG00000011549Gallus gallus
 ANKS1BENSG00000185046Homo sapiens
 Anks1bENSMUSG00000058589Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
caskin1 / CASK interacting protein 1 / Q8WXD9*ENSDARG0000004610719
si:ch211-119c20.2 / Q8VHK1* / Q8WXE0* / CASKIN2* / CASK interacting protein 2*ENSDARG0000004381818
anks1ab / ankyrin repeat and sterile alpha motif domain containing 1Ab / Anks1* / Q92625* / ANKS1A* / P59672* / Ankyrin repeat and SAM domain-containing protein 1A * / ankyrin repeat and st...ENSDARG0000007890118
si:dkeyp-9d4.3 / Q6P9K8* / Q8WXD9* / CASKIN1* / CASK interacting protein 1*ENSDARG0000010016617
anks1aa / ankyrin repeat and sterile alpha motif domain containing 1Aa / Anks1* / Q92625* / ANKS1A* / P59672* / Ankyrin repeat and SAM domain-containing protein 1A * / ankyrin repeat and st...ENSDARG0000006239615
ankrd6b / ankyrin repeat domain 6b / Q9Y2G4* / Q69ZU8* / ANKRD6* / ankyrin repeat domain 6* / Mus musculus ankyrin repeat domain 6 (Ankrd6), transcript variant 4, mRNA.*ENSDARG0000002937010
mib1 / Q804S5 / mindbomb E3 ubiquitin protein ligase 1 / Q80SY4* / Q86YT6* / E3 ubiquitin-protein ligase MIB1 *ENSDARG000001021849
ankdd1b / ankyrin repeat and death domain containing 1B / A6NHY2* / Q14DN9* / Ankyrin repeat and death domain-containing protein 1B *ENSDARG000000258668
ankdd1a / ankyrin repeat and death domain containing 1A / Q495B1*ENSDARG000000986478
MIB2 / mindbomb E3 ubiquitin protein ligase 2 / Q96AX9*ENSDARG000001036097
ankrd6a / ankyrin repeat domain 6a / Q9Y2G4* / Q69ZU8* / ANKRD6* / ankyrin repeat domain 6* / Mus musculus ankyrin repeat domain 6 (Ankrd6), transcript variant 4, mRNA.*ENSDARG000000577906


Protein motifs (from Interpro)
Interpro ID Name
 IPR001660  Sterile alpha motif domain
 IPR002110  Ankyrin repeat
 IPR006020  PTB/PI domain
 IPR011993  PH-like domain superfamily
 IPR013761  Sterile alpha motif/pointed domain superfamily
 IPR020683  Ankyrin repeat-containing domain
 IPR033635  Ankyrin repeat and SAM domain-containing protein 1
 IPR033636  Ankyrin repeat and SAM domain-containing protein 1B


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:1900383 regulation of synaptic plasticity by receptor localization to synapse IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0016020 membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr