ENSDARG00000003675


Danio rerio

Features
Gene ID: ENSDARG00000003675
  
Biological name :cryl1
  
Synonyms : cryl1 / crystallin, lambda 1
  
Possible biological names infered from orthology : Lambda-crystallin homolog / Q99KP3 / Q9Y2S2
  
Species: Danio rerio
  
Chr. number: 9
Strand: 1
Band:
Gene start: 21383620
Gene end: 21401302
  
Corresponding Affymetrix probe sets: Dr.13038.1.S1_at (Zebrafish Array)   NM_001045341_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000062655
Ensembl peptide - ENSDARP00000145972
Ensembl peptide - ENSDARP00000108334
NCBI entrez gene - 751596     See in Manteia.
RefSeq - NM_001045341
RefSeq Peptide - NP_001038806
swissprot - B0UYA3
swissprot - B0UYA2
ZFIN ID - ZDB-GENE-060810-7
Ensembl - ENSDARG00000003675
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CRYL1ENSGALG00000017135Gallus gallus
 CRYL1ENSG00000165475Homo sapiens
 Cryl1ENSMUSG00000021947Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR006108  3-hydroxyacyl-CoA dehydrogenase, C-terminal
 IPR006176  3-hydroxyacyl-CoA dehydrogenase, NAD binding
 IPR006180  3-hydroxyacyl-CoA dehydrogenase, conserved site
 IPR008927  6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily
 IPR013328  6-phosphogluconate dehydrogenase, domain 2
 IPR016040  NAD(P)-binding domain
 IPR022694  3-hydroxyacyl-CoA dehydrogenase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006631 fatty acid metabolic process IEA
 biological_processGO:0055114 oxidation-reduction process IEA
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEA
 molecular_functionGO:0016491 oxidoreductase activity IEA
 molecular_functionGO:0070403 NAD+ binding IEA


Pathways (from Reactome)
Pathway description
Formation of xylulose-5-phosphate


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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