ENSDARG00000004840


Danio rerio

Features
Gene ID: ENSDARG00000004840
  
Biological name :rassf1
  
Synonyms : Ras association (RalGDS/AF-6) domain family 1 / rassf1
  
Possible biological names infered from orthology : Q99MK9 / Q9NS23 / Ras association domain family member 1 / Ras association (RalGDS/AF-6) domain family member 1
  
Species: Danio rerio
  
Chr. number: 22
Strand: 1
Band:
Gene start: 10645088
Gene end: 10658520
  
Corresponding Affymetrix probe sets: Dr.9366.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000035351
Ensembl peptide - ENSDARP00000115000
Ensembl peptide - ENSDARP00000119596
NCBI entrez gene - 447811     See in Manteia.
RefSeq - XM_005173951
RefSeq - XM_005173952
RefSeq Peptide - NP_001004550
swissprot - Q66HV2
swissprot - F6P946
ZFIN ID - ZDB-GENE-040912-14
Ensembl - ENSDARG00000004840
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RASSF1ENSGALG00000038951Gallus gallus
 Q9NS23ENSG00000068028Homo sapiens
 Q99MK9ENSMUSG00000010067Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RASSF5 / si:dkey-85p17.3 / Q5EBH1* / Q8WWW0* / Ras association domain family member 5* / Ras association domain-containing protein 5 *ENSDARG0000007060136
rassf3 / Ras association (RalGDS/AF-6) domain family member 3 / Q86WH2* / Q99P51* / Ras association domain family member 3* / Ras association domain-containing protein 3 *ENSDARG0000005906434


Protein motifs (from Interpro)
Interpro ID Name
 IPR000159  Ras-associating (RA) domain
 IPR001368  TNFR/NGFR cysteine-rich region
 IPR002219  Protein kinase C-like, phorbol ester/diacylglycerol-binding domain
 IPR011524  SARAH domain
 IPR029071  Ubiquitin-like domain superfamily
 IPR033600  Ras association domain-containing protein 1
 IPR033614  C-terminal RASSF family


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007165 signal transduction IEA
 biological_processGO:0035556 intracellular signal transduction IEA
 biological_processGO:0070507 regulation of microtubule cytoskeleton organization IEA
 cellular_componentGO:0005622 intracellular IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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