ENSDARG00000005058


Danio rerio

Features
Gene ID: ENSDARG00000005058
  
Biological name :ncapd2
  
Synonyms : ncapd2 / non-SMC condensin I complex, subunit D2
  
Possible biological names infered from orthology : Q15021
  
Species: Danio rerio
  
Chr. number: 2
Strand: -1
Band:
Gene start: 44749201
Gene end: 44777679
  
Corresponding Affymetrix probe sets: Dr.4309.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000103943
Ensembl peptide - ENSDARP00000139252
NCBI entrez gene - 552978     See in Manteia.
RefSeq - NM_001162502
RefSeq - XM_005171381
RefSeq Peptide - NP_001155974
swissprot - B0V123
swissprot - A0A0R4IRW7
ZFIN ID - ZDB-GENE-050506-59
Ensembl - ENSDARG00000005058
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 NCAPD2ENSGALG00000039448Gallus gallus
 NCAPD2ENSG00000010292Homo sapiens
 Ncapd2ENSMUSG00000038252Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR007673  Condensin subunit 1
 IPR011989  Armadillo-like helical
 IPR016024  Armadillo-type fold
 IPR024324  Condensin complex subunit 1, N-terminal
 IPR026971  Condensin subunit 1/Condensin-2 complex subunit D3
 IPR032682  Condensin complex subunit 1, C-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000070 mitotic sister chromatid segregation IMP
 biological_processGO:0000278 mitotic cell cycle IEA
 biological_processGO:0007049 cell cycle IEA
 biological_processGO:0007076 mitotic chromosome condensation IEA
 biological_processGO:0010032 meiotic chromosome condensation IBA
 biological_processGO:0030261 chromosome condensation IEA
 biological_processGO:0051301 cell division IEA
 biological_processGO:0051304 chromosome separation IBA
 cellular_componentGO:0000779 condensed chromosome, centromeric region IBA
 cellular_componentGO:0000799 nuclear condensin complex IBA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003682 chromatin binding IBA
 molecular_functionGO:0042393 histone binding IBA


Pathways (from Reactome)
Pathway description
Condensation of Prometaphase Chromosomes


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000107 eye eye decreased size , abnormal
Show

 ZFA:0000152 retina retina decreased size , abnormal
retina nucleus increased size , abnormal
retina nucleus variability of shape , abnormal
Show

 ZFA:0001094 whole organism whole organism ploidy , abnormal
Show

 ZFA:0001114 head head decreased size , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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