ENSGALG00000039448


Gallus gallus

Features
Gene ID: ENSGALG00000039448
  
Biological name :NCAPD2
  
Synonyms : condensin complex subunit 1 / NCAPD2
  
Possible biological names infered from orthology : non-SMC condensin I complex subunit D2 / Q15021
  
Species: Gallus gallus
  
Chr. number: 1
Strand: 1
Band:
Gene start: 76920908
Gene end: 76944751
  
Corresponding Affymetrix probe sets: Gga.2363.1.S1_at (Chicken Array)   Gga.2363.2.S1_a_at (Chicken Array)   GgaAffx.9168.1.S1_s_at (Chicken Array)   GgaAffx.9168.3.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000047660
Ensembl peptide - ENSGALP00000064359
Ensembl peptide - ENSGALP00000060291
Ensembl peptide - ENSGALP00000057195
NCBI entrez gene - 418275     See in Manteia.
RefSeq - NM_001080862
RefSeq - XM_015293345
RefSeq Peptide - NP_001074331
swissprot - A0A1L1RZS1
swissprot - A0A1D5P4P8
swissprot - A0A1L1RND5
swissprot - A0A1D5PW66
Ensembl - ENSGALG00000039448
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ncapd2ENSDARG00000005058Danio rerio
 NCAPD2ENSG00000010292Homo sapiens
 Ncapd2ENSMUSG00000038252Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR007673  Condensin subunit 1
 IPR011989  Armadillo-like helical
 IPR016024  Armadillo-type fold
 IPR024324  Condensin complex subunit 1, N-terminal
 IPR026971  Condensin subunit 1/Condensin-2 complex subunit D3
 IPR032682  Condensin complex subunit 1, C-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000278 mitotic cell cycle IEA
 biological_processGO:0007049 cell cycle IEA
 biological_processGO:0007076 mitotic chromosome condensation IEA
 biological_processGO:0030261 chromosome condensation IEA
 biological_processGO:0051301 cell division IEA
 cellular_componentGO:0000228 nuclear chromosome IEA
 cellular_componentGO:0000793 condensed chromosome IEA
 cellular_componentGO:0000796 condensin complex IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IEA
 molecular_functionGO:0042393 histone binding IEA


Pathways (from Reactome)
Pathway description
Condensation of Prometaphase Chromosomes


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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