ENSDARG00000005216


Danio rerio

Features
Gene ID: ENSDARG00000005216
  
Biological name :zgc:158328
  
Synonyms : zgc:158328
  
Possible biological names infered from orthology : Egfem1 / EGF-like and EMI domain-containing protein 1 / Q8C088
  
Species: Danio rerio
  
Chr. number: 15
Strand: 1
Band:
Gene start: 35253247
Gene end: 35339302
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000066736
Ensembl peptide - ENSDARP00000140449
swissprot - A0A0R4IYY9
swissprot - F1RE47
ZFIN ID - ZDB-GENE-070112-1202
Ensembl - ENSDARG00000005216
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000009458Gallus gallus
 Egfem1ENSMUSG00000063600Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
megf6a / multiple EGF-like-domains 6a / MEGF6* / O75095* / multiple EGF like domains 6*ENSDARG0000007919945
megf6b / multiple EGF-like-domains 6b / MEGF6* / O75095* / multiple EGF like domains 6*ENSDARG0000007480845
megf11 / multiple EGF-like-domains 11 / A6BM72* / Q80T91* / Multiple epidermal growth factor-like domains protein 11 *ENSDARG0000006268618
pear1 / platelet endothelial aggregation receptor 1 / Q5VY43* / Q8VIK5*ENSDARG0000006075317
megf10 / multiple EGF-like-domains 10 / Q6DIB5* / Q96KG7* / Multiple epidermal growth factor-like domains protein 10 *ENSDARG0000001722915
scarf1 / scavenger receptor class F, member 1 / Q14162* / Q5ND28*ENSDARG0000007728511
CABZ01077124.1 / Q96GP6* / SCARF2* / scavenger receptor class F member 2*ENSDARG0000011482510


Protein motifs (from Interpro)
Interpro ID Name
 IPR000152  EGF-type aspartate/asparagine hydroxylation site
 IPR000742  EGF-like domain
 IPR001881  EGF-like calcium-binding domain
 IPR002049  Laminin EGF domain
 IPR009030  Growth factor receptor cysteine-rich domain superfamily
 IPR011489  EMI domain
 IPR013032  EGF-like, conserved site
 IPR018097  EGF-like calcium-binding, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr