ENSDARG00000077285


Danio rerio

Features
Gene ID: ENSDARG00000077285
  
Biological name :scarf1
  
Synonyms : scarf1 / scavenger receptor class F, member 1
  
Possible biological names infered from orthology : Q14162 / Q5ND28
  
Species: Danio rerio
  
Chr. number: 15
Strand: -1
Band:
Gene start: 28208440
Gene end: 28223906
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000098630
Ensembl peptide - ENSDARP00000113737
NCBI entrez gene - 100005273     See in Manteia.
swissprot - E7FBT2
swissprot - F1QTI6
ZFIN ID - ZDB-GENE-030131-8778
Ensembl - ENSDARG00000077285
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q14162ENSG00000074660Homo sapiens
 Q5ND28ENSMUSG00000038188Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CABZ01077124.1 / Q96GP6* / SCARF2* / scavenger receptor class F member 2*ENSDARG0000011482525
megf11 / multiple EGF-like-domains 11 / A6BM72* / Q80T91* / Multiple epidermal growth factor-like domains protein 11 *ENSDARG0000006268622
pear1 / platelet endothelial aggregation receptor 1 / Q5VY43* / Q8VIK5*ENSDARG0000006075321
megf6b / multiple EGF-like-domains 6b / MEGF6* / O75095* / multiple EGF like domains 6*ENSDARG0000007480820
megf10 / multiple EGF-like-domains 10 / Q6DIB5* / Q96KG7* / Multiple epidermal growth factor-like domains protein 10 *ENSDARG0000001722920
megf6a / multiple EGF-like-domains 6a / MEGF6* / O75095* / multiple EGF like domains 6*ENSDARG0000007919919
zgc:158328 / Egfem1* / Q8C088* / EGF-like and EMI domain-containing protein 1 *ENSDARG0000000521611


Protein motifs (from Interpro)
Interpro ID Name
 IPR000742  EGF-like domain
 IPR002049  Laminin EGF domain
 IPR013032  EGF-like, conserved site
 IPR033329  Scavenger receptor class F member 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006898 receptor-mediated endocytosis IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005044 scavenger receptor activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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