ENSDARG00000005230


Danio rerio

Features
Gene ID: ENSDARG00000005230
  
Biological name :ssr2
  
Synonyms : signal sequence receptor, beta / ssr2
  
Possible biological names infered from orthology : P43308 / Q9CPW5 / signal sequence receptor subunit 2
  
Species: Danio rerio
  
Chr. number: 19
Strand: -1
Band:
Gene start: 11231083
Gene end: 11238721
  
Corresponding Affymetrix probe sets: Dr.1209.1.S1_at (Zebrafish Array)   NM_001001399_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000123966
Ensembl peptide - ENSDARP00000124316
Ensembl peptide - ENSDARP00000133134
NCBI entrez gene - 83414     See in Manteia.
RefSeq - NM_001001399
RefSeq Peptide - NP_001001399
swissprot - F8W3Y3
swissprot - A0A0R4IEM9
swissprot - F8W477
swissprot - Q6DHQ2
ZFIN ID - ZDB-GENE-010413-1
Ensembl - ENSDARG00000005230
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SSR2ENSGALG00000000764Gallus gallus
 SSR2ENSG00000163479Homo sapiens
 Ssr2ENSMUSG00000041355Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR008856  Translocon-associated protein subunit beta
 IPR013783  Immunoglobulin-like fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006613 cotranslational protein targeting to membrane IBA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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