ENSDARG00000005236


Danio rerio

Features
Gene ID: ENSDARG00000005236
  
Biological name :srcap
  
Synonyms : Snf2-related CREBBP activator protein / srcap
  
Possible biological names infered from orthology : AC106886.5 / Gm42715 / Q6ZRS2
  
Species: Danio rerio
  
Chr. number: 12
Strand: 1
Band:
Gene start: 27061720
Gene end: 27092286
  
Corresponding Affymetrix probe sets: Dr.26303.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000127209
Ensembl peptide - ENSDARP00000157525
NCBI entrez gene - 563456     See in Manteia.
RefSeq - XM_005156310
swissprot - E7FAZ7
ZFIN ID - ZDB-GENE-041008-127
Ensembl - ENSDARG00000005236
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 AC106886.5ENSG00000282034Homo sapiens
 SRCAPENSG00000080603Homo sapiens
 Gm42715ENSMUSG00000107023Mus musculus
 SrcapENSMUSG00000053877Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ep400 / E1A binding protein p400 / Q8CHI8* / Q96L91*ENSDARG0000010096516


Protein motifs (from Interpro)
Interpro ID Name
 IPR000330  SNF2-related, N-terminal domain
 IPR001650  Helicase, C-terminal
 IPR002034  Alpha-isopropylmalate/homocitrate synthase, conserved site
 IPR014001  Helicase superfamily 1/2, ATP-binding domain
 IPR014012  Helicase/SANT-associated domain
 IPR017956  AT hook, DNA-binding motif
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0019752 carboxylic acid metabolic process IEA
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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