ENSMUSG00000053877


Mus musculus

Features
Gene ID: ENSMUSG00000053877
  
Biological name :Srcap
  
Synonyms : Snf2-related CREBBP activator protein / Srcap
  
Possible biological names infered from orthology : AC106886.5 / Q6ZRS2
  
Species: Mus musculus
  
Chr. number: 7
Strand: 1
Band: F3
Gene start: 127511983
Gene end: 127561219
  
Corresponding Affymetrix probe sets: 10416732 (MoGene1.0st)   10557655 (MoGene1.0st)   10557703 (MoGene1.0st)   1439978_at (Mouse Genome 430 2.0 Array)   1441653_at (Mouse Genome 430 2.0 Array)   1457718_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000063817
Ensembl peptide - ENSMUSP00000141098
Ensembl peptide - ENSMUSP00000140882
Ensembl peptide - ENSMUSP00000140395
Ensembl peptide - ENSMUSP00000140036
Ensembl peptide - ENSMUSP00000139536
Ensembl peptide - ENSMUSP00000139399
Ensembl peptide - ENSMUSP00000095635
NCBI entrez gene - 100043597     See in Manteia.
MGI - MGI:2444036
RefSeq - NM_001304266
RefSeq Peptide - NP_001291195
swissprot - A0A087WQY5
swissprot - A0A087WQ44
swissprot - A0A087WNX7
swissprot - A0A087WNL7
swissprot - E9Q9V7
swissprot - Q8BQA6
swissprot - A0A087WSL6
swissprot - A0A087WS36
Ensembl - ENSMUSG00000053877
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 srcapENSDARG00000005236Danio rerio
 AC106886.5ENSG00000282034Homo sapiens
 SRCAPENSG00000080603Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Gm42715 / SRCAP* / Q6ZRS2* / AC106886.5* / Snf2 related CREBBP activator protein*ENSMUSG0000010702395
Ep400 / Q8CHI8 / E1A-binding protein p400 / Q96L91*ENSMUSG0000002950522


Protein motifs (from Interpro)
Interpro ID Name
 IPR000330  SNF2-related, N-terminal domain
 IPR001650  Helicase, C-terminal
 IPR014001  Helicase superfamily 1/2, ATP-binding domain
 IPR014012  Helicase/SANT-associated domain
 IPR017956  AT hook, DNA-binding motif
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005634 nucleus ISO
 cellular_componentGO:0005654 nucleoplasm ISO
 cellular_componentGO:0005794 Golgi apparatus ISO
 cellular_componentGO:0016604 nuclear body ISO
 cellular_componentGO:0048471 perinuclear region of cytoplasm ISO
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0005524 ATP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr