ENSDARG00000005867


Danio rerio

Features
Gene ID: ENSDARG00000005867
  
Biological name :gon4l
  
Synonyms : gon4l / gon-4-like (C. elegans)
  
Possible biological names infered from orthology : gon-4 like / Q3T8J9 / Q9H869 / YY1AP1 / YY1 associated protein 1
  
Species: Danio rerio
  
Chr. number: 16
Strand: 1
Band:
Gene start: 28994709
Gene end: 29024769
  
Corresponding Affymetrix probe sets: Dr.12322.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000082456
NCBI entrez gene - 555764     See in Manteia.
RefSeq - NM_001201535
RefSeq Peptide - NP_001188464
swissprot - F1QI87
ZFIN ID - ZDB-GENE-070117-2447
Ensembl - ENSDARG00000005867
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000014643Gallus gallus
 GON4LENSG00000116580Homo sapiens
 Q9H869ENSG00000163374Homo sapiens
 Gon4lENSMUSG00000054199Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:dkey-27c15.3 / GON4L* / Q3T8J9* / Q9H869* / YY1AP1* / gon-4 like* / gon-4-like (C.elegans)* / YY1 associated protein 1*ENSDARG0000005684722


Protein motifs (from Interpro)
Interpro ID Name
 IPR003822  Paired amphipathic helix
 IPR009057  Homeobox-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000008 brain brain increased amount , abnormal
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 ZFA:0000029 hindbrain hindbrain apoptotic process increased occurrence , abnormal
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 ZFA:0000035 lens lens apoptotic process increased occurrence , abnormal
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 ZFA:0000106 extension extension decreased length , abnormal
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 ZFA:0000107 eye eye decreased size , abnormal
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 ZFA:0000128 midbrain midbrain apoptotic process increased occurrence , abnormal
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 ZFA:0000151 pronephros pronephros increased amount , abnormal
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 ZFA:0000152 retina retina apoptotic process increased occurrence , abnormal
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 ZFA:0000155 somite somite morphology , abnormal
somite shape , abnormal
somite decreased amount , abnormal
somite absent , abnormal
somite posterior side absent , abnormal
somite shape , ameliorated
Show

 ZFA:0000279 segmental plate segmental plate anterior-most region absent , abnormal
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 ZFA:0001069 ventral fin fold ventral fin fold posterior-most region tapered , abnormal
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 ZFA:0001094 whole organism whole organism anterior-posterior axis decreased length , abnormal
whole organism viability , abnormal
whole organism has fewer parts of type nucleate erythrocyte hemoglobin complex, abnormal
whole organism shape , abnormal
whole organism lethal (sensu genetics) , abnormal
whole organism apoptotic process occurrence , ameliorated
whole organism apoptotic process increased occurrence , abnormal
whole organism site of double-strand break increased amount , abnormal
whole organism increased amount , abnormal
whole organism decreased length , abnormal
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 ZFA:0001114 head head decreased size , abnormal
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 ZFA:0001115 trunk trunk posterior side increased amount , abnormal
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 ZFA:0001117 post-vent region post-vent region bent , abnormal
post-vent region curved ventral , abnormal
post-vent region quality , abnormal
post-vent region increased amount , abnormal
post-vent region apoptotic process increased occurrence , abnormal
post-vent region morphology , abnormal
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 ZFA:0001120 neuroectoderm neuroectoderm apoptotic , abnormal
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 ZFA:0001462 somite border somite border amorphous , abnormal
somite border morphology , ameliorated
Show

 ZFA:0009044 blood cell blood cell decreased amount , abnormal
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 ZFA:0009256 nucleate erythrocyte nucleate erythrocyte immature , abnormal
nucleate erythrocyte hypoplastic , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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