ENSDARG00000006397


Danio rerio

Features
Gene ID: ENSDARG00000006397
  
Biological name :laptm4a
  
Synonyms : laptm4a / lysosomal protein transmembrane 4 alpha
  
Possible biological names infered from orthology : lysosomal-associated protein transmembrane 4A / Q15012
  
Species: Danio rerio
  
Chr. number: 20
Strand: -1
Band:
Gene start: 43775793
Gene end: 43786515
  
Corresponding Affymetrix probe sets: Dr.2933.1.A1_at (Zebrafish Array)   NM_214685_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000006123
NCBI entrez gene - 100003844     See in Manteia.
RefSeq - NM_214685
RefSeq Peptide - NP_999850
swissprot - Q5TYX5
ZFIN ID - ZDB-GENE-030131-1024
Ensembl - ENSDARG00000006397
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LAPTM4AENSGALG00000016479Gallus gallus
 Q15012ENSG00000068697Homo sapiens
 Laptm4aENSMUSG00000020585Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
laptm4b / lysosomal protein transmembrane 4 beta / Q86VI4* / Q91XQ6* / Lysosomal-associated transmembrane protein 4B *ENSDARG0000003587045


Protein motifs (from Interpro)
Interpro ID Name
 IPR004687  Lysosomal-associated transmembrane protein 4/5
 IPR018396  Lysosomal-associated transmembrane protein, 4A/5


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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