ENSDARG00000006544


Danio rerio

Features
Gene ID: ENSDARG00000006544
  
Biological name :c1qtnf6b
  
Synonyms : C1q and TNF related 6b / c1qtnf6b
  
Possible biological names infered from orthology : C1q and TNF related 6 / C1QTNF6 / Complement C1q tumor necrosis factor-related protein 6 / Q6IR41 / Q9BXI9
  
Species: Danio rerio
  
Chr. number: 6
Strand: -1
Band:
Gene start: 214269
Gene end: 218882
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000013553
NCBI entrez gene - 570839     See in Manteia.
swissprot - F1R342
ZFIN ID - ZDB-GENE-080411-1
Ensembl - ENSDARG00000006544
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 C1QTNF6ENSGALG00000027067Gallus gallus
 Q9BXI9ENSG00000133466Homo sapiens
 Q6IR41ENSMUSG00000022440Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
c1qtnf6a / C1q and TNF related 6a / Q6IR41* / Q9BXI9* / C1QTNF6* / C1q and TNF related 6* / Complement C1q tumor necrosis factor-related protein 6 *ENSDARG0000005517561
c1qtnf1 / C1q and TNF related 1 / Q9BXJ1* / Q9QXP7* / Complement C1q tumor necrosis factor-related protein 1 *ENSDARG0000008887856
c1qtnf4 / C1q and TNF related 4 / Q8R066* / Q9BXJ3* / Complement C1q tumor necrosis factor-related protein 4 *ENSDARG0000002429927
si:ch211-219a15.3ENSDARG0000008765924
c1qa / complement component 1, q subcomponent, A chain / P02745* / P98086* / complement C1q A chain* / Complement C1q subcomponent subunit A *ENSDARG0000004461324


Protein motifs (from Interpro)
Interpro ID Name
 IPR001073  C1q domain
 IPR008160  Collagen triple helix repeat
 IPR008983  Tumour necrosis factor-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005581 collagen trimer IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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