ENSMUSG00000022440


Mus musculus

Features
Gene ID: ENSMUSG00000022440
  
Biological name :C1qtnf6
  
Synonyms : C1qtnf6 / Complement C1q tumor necrosis factor-related protein 6 / Q6IR41
  
Possible biological names infered from orthology : C1q and TNF related 6 / Q9BXI9
  
Species: Mus musculus
  
Chr. number: 15
Strand: -1
Band: E1
Gene start: 78523346
Gene end: 78531416
  
Corresponding Affymetrix probe sets: 10430358 (MoGene1.0st)   1431856_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000023075
Ensembl peptide - ENSMUSP00000155188
Ensembl peptide - ENSMUSP00000155221
NCBI entrez gene - 72709     See in Manteia.
MGI - MGI:1919959
RefSeq - XM_006521455
RefSeq - NM_001204152
RefSeq - NM_001204153
RefSeq - NM_028331
RefSeq - XM_006521452
RefSeq - XM_006521453
RefSeq Peptide - NP_001191081
RefSeq Peptide - NP_001191082
RefSeq Peptide - NP_082607
swissprot - Q6IR41
Ensembl - ENSMUSG00000022440
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 c1qtnf6aENSDARG00000055175Danio rerio
 c1qtnf6bENSDARG00000006544Danio rerio
 C1QTNF6ENSGALG00000027067Gallus gallus
 Q9BXI9ENSG00000133466Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q9QXP7 / C1qtnf1 / Complement C1q tumor necrosis factor-related protein 1 / Q9BXJ1* / C1q and TNF related 1*ENSMUSG0000001744650
Q8R066 / C1qtnf4 / Complement C1q tumor necrosis factor-related protein 4 / Q9BXJ3* / C1q and TNF related 4*ENSMUSG0000004079424
C1qa / P98086 / Complement C1q subcomponent subunit A / P02745* / complement C1q A chain*ENSMUSG0000003688722


Protein motifs (from Interpro)
Interpro ID Name
 IPR001073  C1q domain
 IPR008160  Collagen triple helix repeat
 IPR008983  Tumour necrosis factor-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0051259 protein complex oligomerization IDA
 biological_processGO:0070208 protein heterotrimerization IPI
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005581 collagen trimer IEA
 cellular_componentGO:0005615 extracellular space IDA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0042802 identical protein binding IDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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