ENSDARG00000006869


Danio rerio

Features
Gene ID: ENSDARG00000006869
  
Biological name :stx17
  
Synonyms : stx17 / syntaxin 17
  
Possible biological names infered from orthology : P56962 / Q9D0I4
  
Species: Danio rerio
  
Chr. number: 16
Strand: 1
Band:
Gene start: 27383717
Gene end: 27405460
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000113713
Ensembl peptide - ENSDARP00000114720
NCBI entrez gene - 492808     See in Manteia.
RefSeq - NM_001007449
RefSeq Peptide - NP_001007450
swissprot - F1QFP8
swissprot - E9QID0
ZFIN ID - ZDB-GENE-041114-164
Ensembl - ENSDARG00000006869
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 STX17ENSGALG00000013462Gallus gallus
 STX17ENSG00000136874Homo sapiens
 Stx17ENSMUSG00000061455Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000727  Target SNARE coiled-coil homology domain
 IPR010989  SNARE
 IPR028676  Syntaxin-17


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IBA
 biological_processGO:0006887 exocytosis IBA
 biological_processGO:0006888 ER to Golgi vesicle-mediated transport IEA
 biological_processGO:0006906 vesicle fusion IBA
 biological_processGO:0016192 vesicle-mediated transport IEA
 biological_processGO:0048278 vesicle docking IBA
 biological_processGO:0097111 endoplasmic reticulum-Golgi intermediate compartment organization IEA
 biological_processGO:0097352 autophagosome maturation IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005886 plasma membrane IBA
 cellular_componentGO:0012505 endomembrane system IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IBA
 cellular_componentGO:0031201 SNARE complex IBA
 molecular_functionGO:0000149 SNARE binding IEA
 molecular_functionGO:0005484 SNAP receptor activity IBA


Pathways (from Reactome)
Pathway description
COPII-mediated vesicle transport


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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