ENSMUSG00000061455


Mus musculus

Features
Gene ID: ENSMUSG00000061455
  
Biological name :Stx17
  
Synonyms : Q9D0I4 / Stx17 / syntaxin 17
  
Possible biological names infered from orthology : P56962
  
Species: Mus musculus
  
Chr. number: 4
Strand: 1
Band: B1
Gene start: 48124915
Gene end: 48186507
  
Corresponding Affymetrix probe sets: 10504849 (MoGene1.0st)   1427924_at (Mouse Genome 430 2.0 Array)   1427925_at (Mouse Genome 430 2.0 Array)   1428917_at (Mouse Genome 430 2.0 Array)   1431929_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000068087
Ensembl peptide - ENSMUSP00000103348
Ensembl peptide - ENSMUSP00000103349
Ensembl peptide - ENSMUSP00000117512
NCBI entrez gene - 67727     See in Manteia.
MGI - MGI:1914977
RefSeq - XM_017320367
RefSeq - NM_026343
RefSeq - XM_006538208
RefSeq - XM_011250090
RefSeq Peptide - NP_080619
swissprot - Q9D614
swissprot - B1AVI2
swissprot - Q9D0I4
Ensembl - ENSMUSG00000061455
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 stx17ENSDARG00000006869Danio rerio
 STX17ENSGALG00000013462Gallus gallus
 STX17ENSG00000136874Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000727  Target SNARE coiled-coil homology domain
 IPR006012  Syntaxin/epimorphin, conserved site
 IPR010989  SNARE
 IPR028676  Syntaxin-17


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IBA
 biological_processGO:0006887 exocytosis IBA
 biological_processGO:0006888 ER to Golgi vesicle-mediated transport ISS
 biological_processGO:0006906 vesicle fusion IBA
 biological_processGO:0006914 autophagy IEA
 biological_processGO:0007030 Golgi organization ISS
 biological_processGO:0016192 vesicle-mediated transport IEA
 biological_processGO:0016240 autophagosome membrane docking ISO
 biological_processGO:0034497 protein localization to phagophore assembly site ISO
 biological_processGO:0048278 vesicle docking IBA
 biological_processGO:0061025 membrane fusion IEA
 biological_processGO:0097111 endoplasmic reticulum-Golgi intermediate compartment organization ISS
 biological_processGO:0097352 autophagosome maturation ISO
 cellular_componentGO:0000421 autophagosome membrane ISO
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005739 mitochondrion ISS
 cellular_componentGO:0005776 autophagosome ISO
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane ISO
 cellular_componentGO:0005793 endoplasmic reticulum-Golgi intermediate compartment ISS
 cellular_componentGO:0005829 cytosol ISS
 cellular_componentGO:0005886 plasma membrane IBA
 cellular_componentGO:0012505 endomembrane system IBA
 cellular_componentGO:0012507 ER to Golgi transport vesicle membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IBA
 cellular_componentGO:0030134 COPII-coated ER to Golgi transport vesicle ISS
 cellular_componentGO:0030868 smooth endoplasmic reticulum membrane ISO
 cellular_componentGO:0030897 HOPS complex ISO
 cellular_componentGO:0031201 SNARE complex ISS
 cellular_componentGO:0031410 cytoplasmic vesicle IEA
 cellular_componentGO:0033116 endoplasmic reticulum-Golgi intermediate compartment membrane IEA
 cellular_componentGO:0044233 ER-mitochondrion membrane contact site ISO
 molecular_functionGO:0000149 SNARE binding ISS
 molecular_functionGO:0005484 SNAP receptor activity ISS
 molecular_functionGO:0019901 protein kinase binding IEA
 molecular_functionGO:0019903 protein phosphatase binding ISO


Pathways (from Reactome)
Pathway description
COPII-mediated vesicle transport


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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