ENSDARG00000008407


Danio rerio

Features
Gene ID: ENSDARG00000008407
  
Biological name :tspan7b
  
Synonyms : tetraspanin 7b / tspan7b
  
Possible biological names infered from orthology : AF241726.2 / P41732 / Q62283 / tetraspanin 7 / TSPAN7
  
Species: Danio rerio
  
Chr. number: 22
Strand: -1
Band:
Gene start: 11440705
Gene end: 11493236
  
Corresponding Affymetrix probe sets: Dr.3559.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000018179
NCBI entrez gene - 449539     See in Manteia.
RefSeq - NM_001130818
RefSeq Peptide - NP_001124290
swissprot - B0VEQ2
ZFIN ID - ZDB-GENE-040927-5
Ensembl - ENSDARG00000008407
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000016251Gallus gallus
 AF241726.2ENSG00000250349Homo sapiens
 P41732ENSG00000156298Homo sapiens
 Q62283ENSMUSG00000058254Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tspan7 / tetraspanin 7 / O43657* / TSPAN6* / tetraspanin 6*ENSDARG0000001575961
cd151 / CD151 molecule / P48509* / O35566* / CD151 antigen * / CD151 molecule (Raph blood group)*ENSDARG0000003828831
tspan11 / tetraspanin 11 / A1L157* / Q9D1D1*ENSDARG0000000178131
tspan17 / tetraspanin 17 / Q96FV3*ENSDARG0000011406730
cd63 / CD63 molecule / P08962* / P41731* / CD63 antigen *ENSDARG0000002514729
cd151l / CD151 antigen, like / CD151* / P48509* / O35566* / CD151 antigen * / CD151 molecule (Raph blood group)*ENSDARG0000006862929
tspan3b / tetraspanin 3b / O60637* / Q9QY33* / TSPAN3* / tetraspanin 3*ENSDARG0000005355929
tspan3a / tetraspanin 3a / O60637* / Q9QY33* / TSPAN3* / tetraspanin 3*ENSDARG0000003475329
tspan5a / tetraspanin 5a / P62079* / TSPAN5* / tetraspanin 5*ENSDARG0000008603327
tspan5b / tetraspanin 5b / P62079* / P62080* / TSPAN5* / tetraspanin 5*ENSDARG0000007044927
Q6NWG0 / tspan36 / tetraspanin 36ENSDARG0000002454026
tspan14 / tetraspanin 14 / Q8NG11* / Q8QZY6*ENSDARG0000005593825
tspan10 / tetraspanin 10ENSDARG0000004476725
zgc:113223ENSDARG0000009025324
Q5RH71 / tspan33a / tetraspanin 33a / Q8R3S2* / Q86UF1* / TSPAN33* / tetraspanin 33*ENSDARG0000000449724
tspan15 / tetraspanin 15 / F7BWT7* / O95858*ENSDARG0000003945523
tspan33b / tetraspanin 33bENSDARG0000004218922
tspan37 / tetraspanin 37ENSDARG0000009509020
zgc:110329ENSDARG0000003553220


Protein motifs (from Interpro)
Interpro ID Name
 IPR000301  Tetraspanin
 IPR008952  Tetraspanin, EC2 domain superfamily
 IPR018499  Tetraspanin/Peripherin
 IPR018503  Tetraspanin, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007166 cell surface receptor signaling pathway IBA
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
Trafficking of GluR2-containing AMPA receptors


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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