ENSDARG00000008890


Danio rerio

Features
Gene ID: ENSDARG00000008890
  
Biological name :ctns
  
Synonyms : ctns / cystinosin, lysosomal cystine transporter
  
Possible biological names infered from orthology : Mus musculus cystinosis, nephropathic (Ctns), transcript variant 2, mRNA. / O60931 / P57757
  
Species: Danio rerio
  
Chr. number: 11
Strand: 1
Band:
Gene start: 6281647
Gene end: 6293709
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000024767
NCBI entrez gene - 553594     See in Manteia.
RefSeq - NM_001020571
RefSeq Peptide - NP_001018407
swissprot - F1QM07
ZFIN ID - ZDB-GENE-050522-352
Ensembl - ENSDARG00000008890
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CTNSENSGALG00000004628Gallus gallus
 CTNSENSG00000040531Homo sapiens
 CtnsENSMUSG00000005949Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR005282  Lysosomal cystine transporter
 IPR006603  PQ-loop repeat


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0015811 L-cystine transport IBA
 cellular_componentGO:0005765 lysosomal membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0015184 L-cystine transmembrane transporter activity IBA


Pathways (from Reactome)
Pathway description
Transport of inorganic cations/anions and amino acids/oligopeptides
Miscellaneous transport and binding events


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr