ENSGALG00000004628


Gallus gallus

Features
Gene ID: ENSGALG00000004628
  
Biological name :CTNS
  
Synonyms : CTNS / cystinosin, lysosomal cystine transporter
  
Possible biological names infered from orthology : Mus musculus cystinosis, nephropathic (Ctns), transcript variant 2, mRNA. / O60931 / P57757
  
Species: Gallus gallus
  
Chr. number: 19
Strand: -1
Band:
Gene start: 6644761
Gene end: 6652458
  
Corresponding Affymetrix probe sets: Gga.9653.2.S1_a_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000007361
NCBI entrez gene - 417606     See in Manteia.
RefSeq - XM_015295844
RefSeq - XM_415851
swissprot - E1BXK0
Ensembl - ENSGALG00000004628
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ctnsENSDARG00000008890Danio rerio
 CTNSENSG00000040531Homo sapiens
 CtnsENSMUSG00000005949Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR005282  Lysosomal cystine transporter
 IPR006603  PQ-loop repeat


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002088 lens development in camera-type eye IEA
 biological_processGO:0006749 glutathione metabolic process IEA
 biological_processGO:0007420 brain development IEA
 biological_processGO:0007616 long-term memory IEA
 biological_processGO:0007625 grooming behavior IEA
 biological_processGO:0007628 adult walking behavior IEA
 biological_processGO:0008542 visual learning IEA
 biological_processGO:0015811 L-cystine transport IEA
 biological_processGO:0046034 ATP metabolic process IEA
 biological_processGO:0050890 cognition IEA
 cellular_componentGO:0005764 lysosome IEA
 cellular_componentGO:0005765 lysosomal membrane IEA
 cellular_componentGO:0005770 late endosome IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IEA
 cellular_componentGO:0045111 intermediate filament cytoskeleton IEA
 molecular_functionGO:0015184 L-cystine transmembrane transporter activity IEA


Pathways (from Reactome)
Pathway description
Transport of inorganic cations/anions and amino acids/oligopeptides
Miscellaneous transport and binding events


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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