ENSDARG00000008976


Danio rerio

Features
Gene ID: ENSDARG00000008976
  
Biological name :mdn1
  
Synonyms : mdn1 / midasin AAA ATPase 1
  
Possible biological names infered from orthology : Q9NU22
  
Species: Danio rerio
  
Chr. number: 20
Strand: -1
Band:
Gene start: 23877299
Gene end: 23946296
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000120622
NCBI entrez gene - 555704     See in Manteia.
RefSeq - XM_003200703
swissprot - F1QMM1
ZFIN ID - ZDB-GENE-041001-138
Ensembl - ENSDARG00000008976
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000038685Gallus gallus
 ENSGALG00000031219Gallus gallus
 ENSGALG00000015733Gallus gallus
 ENSGALG00000039686Gallus gallus
 MDN1ENSG00000112159Homo sapiens
 Mdn1ENSMUSG00000058006Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002035  von Willebrand factor, type A
 IPR003593  AAA+ ATPase domain
 IPR011704  ATPase, dynein-related, AAA domain
 IPR012099  Midasin
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000027 ribosomal large subunit assembly IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016887 ATPase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000054 pericardium pericardium edematous , abnormal
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 ZFA:0000076 swim bladder swim bladder aplastic , abnormal
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 ZFA:0000084 yolk yolk increased size , abnormal
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 ZFA:0000107 eye eye decreased size , abnormal
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 ZFA:0000112 gut gut quality , abnormal
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 ZFA:0000217 inner ear inner ear decreased size , abnormal
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 ZFA:0001094 whole organism whole organism decreased size , abnormal
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 ZFA:0001114 head head decreased size , abnormal
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 ZFA:0001227 mandibular arch skeleton mandibular arch skeleton malformed , abnormal
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 ZFA:0009091 melanocyte melanocyte quality , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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