ENSMUSG00000058006


Mus musculus

Features
Gene ID: ENSMUSG00000058006
  
Biological name :Mdn1
  
Synonyms : Mdn1 / midasin AAA ATPase 1
  
Possible biological names infered from orthology : Q9NU22
  
Species: Mus musculus
  
Chr. number: 4
Strand: 1
Band: A5
Gene start: 32657119
Gene end: 32775217
  
Corresponding Affymetrix probe sets: 10503723 (MoGene1.0st)   1417675_a_at (Mouse Genome 430 2.0 Array)   1432675_at (Mouse Genome 430 2.0 Array)   1439585_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000071569
Ensembl peptide - ENSMUSP00000136222
NCBI entrez gene - 100019     See in Manteia.
MGI - MGI:1926159
RefSeq - XM_006537476
RefSeq - NM_001081392
RefSeq Peptide - NP_001074861
swissprot - A2ANY6
swissprot - J3QMC5
Ensembl - ENSMUSG00000058006
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 mdn1ENSDARG00000008976Danio rerio
 ENSGALG00000038685Gallus gallus
 ENSGALG00000031219Gallus gallus
 ENSGALG00000015733Gallus gallus
 ENSGALG00000039686Gallus gallus
 MDN1ENSG00000112159Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002035  von Willebrand factor, type A
 IPR003593  AAA+ ATPase domain
 IPR011704  ATPase, dynein-related, AAA domain
 IPR012099  Midasin
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR029317  KRBA1 family repeat
 IPR036465  von Willebrand factor A-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000027 ribosomal large subunit assembly IEA
 biological_processGO:0006364 rRNA processing IBA
 cellular_componentGO:0005634 nucleus ISO
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0030687 preribosome, large subunit precursor IBA
 cellular_componentGO:0045111 intermediate filament cytoskeleton IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016887 ATPase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr