ENSDARG00000009285


Danio rerio

Features
Gene ID: ENSDARG00000009285
  
Biological name :rpl15
  
Synonyms : ribosomal protein L15 / rpl15
  
Possible biological names infered from orthology : P61313 / Q9CZM2
  
Species: Danio rerio
  
Chr. number: 19
Strand: 1
Band:
Gene start: 17385561
Gene end: 17395587
  
Corresponding Affymetrix probe sets: Dr.2417.2.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000117485
Ensembl peptide - ENSDARP00000037569
Ensembl peptide - ENSDARP00000116196
Ensembl peptide - ENSDARP00000122141
NCBI entrez gene - 445053     See in Manteia.
swissprot - Q6DHS3
ZFIN ID - ZDB-GENE-040801-183
Ensembl - ENSDARG00000009285
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RPL15ENSGALG00000011290Gallus gallus
 RPL15ENSG00000174748Homo sapiens
 Rpl15ENSMUSG00000012405Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000439  Ribosomal protein L15e
 IPR012678  Ribosomal protein L23/L15e core domain superfamily
 IPR020925  Ribosomal protein L15e, conserved site
 IPR024794  Ribosomal protein L15e core domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002181 cytoplasmic translation IBA
 biological_processGO:0006412 translation IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005840 ribosome IEA
 cellular_componentGO:0022625 cytosolic large ribosomal subunit IBA
 molecular_functionGO:0003723 RNA binding IBA
 molecular_functionGO:0003735 structural constituent of ribosome IBA


Pathways (from Reactome)
Pathway description
L13a-mediated translational silencing of Ceruloplasmin expression
SRP-dependent cotranslational protein targeting to membrane
Major pathway of rRNA processing in the nucleolus and cytosol
Formation of a pool of free 40S subunits
GTP hydrolysis and joining of the 60S ribosomal subunit
Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr