ENSG00000174748


Homo sapiens

Features
Gene ID: ENSG00000174748
  
Biological name :RPL15
  
Synonyms : P61313 / ribosomal protein L15 / RPL15
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 3
Strand: 1
Band: p24.2
Gene start: 23916545
Gene end: 23924374
  
Corresponding Affymetrix probe sets: 221475_s_at (Human Genome U133 Plus 2.0 Array)   221476_s_at (Human Genome U133 Plus 2.0 Array)   240806_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000411176
Ensembl peptide - ENSP00000416692
Ensembl peptide - ENSP00000495696
Ensembl peptide - ENSP00000495694
Ensembl peptide - ENSP00000493759
Ensembl peptide - ENSP00000493717
Ensembl peptide - ENSP00000483260
Ensembl peptide - ENSP00000309334
Ensembl peptide - ENSP00000346867
Ensembl peptide - ENSP00000387925
Ensembl peptide - ENSP00000388529
Ensembl peptide - ENSP00000390193
Ensembl peptide - ENSP00000398788
Ensembl peptide - ENSP00000405590
Ensembl peptide - ENSP00000408243
NCBI entrez gene - 6138     See in Manteia.
OMIM - 604174
RefSeq - NM_001253380
RefSeq - NM_001253382
RefSeq - NM_001253383
RefSeq - NM_001253384
RefSeq - NM_002948
RefSeq - NM_001253379
RefSeq Peptide - NP_001240308
RefSeq Peptide - NP_001240311
RefSeq Peptide - NP_001240312
RefSeq Peptide - NP_001240313
RefSeq Peptide - NP_002939
RefSeq Peptide - NP_001240309
swissprot - P61313
swissprot - E7ERA2
swissprot - E7EQV9
swissprot - E7ENU7
swissprot - A0A024R2Q4
swissprot - E7EX53
Ensembl - ENSG00000174748
  
Related genetic diseases (OMIM): 615550 - ?Diamond-Blackfan anemia 12, 615550
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rpl15ENSDARG00000009285Danio rerio
 RPL15ENSGALG00000011290Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000439  Ribosomal protein L15e
 IPR012678  Ribosomal protein L23/L15e core domain superfamily
 IPR020925  Ribosomal protein L15e, conserved site
 IPR024794  Ribosomal protein L15e core domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay TAS
 biological_processGO:0002181 cytoplasmic translation IBA
 biological_processGO:0006364 rRNA processing TAS
 biological_processGO:0006412 translation TAS
 biological_processGO:0006413 translational initiation TAS
 biological_processGO:0006614 SRP-dependent cotranslational protein targeting to membrane TAS
 biological_processGO:0019083 viral transcription TAS
 biological_processGO:0045471 response to ethanol IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0005840 ribosome TAS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0022625 cytosolic large ribosomal subunit HDA
 cellular_componentGO:0031672 A band IEA
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0003723 RNA binding TAS
 molecular_functionGO:0003735 structural constituent of ribosome TAS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0045296 cadherin binding IDA


Pathways (from Reactome)
Pathway description
L13a-mediated translational silencing of Ceruloplasmin expression
Peptide chain elongation
SRP-dependent cotranslational protein targeting to membrane
Viral mRNA Translation
Selenocysteine synthesis
Major pathway of rRNA processing in the nucleolus and cytosol
Formation of a pool of free 40S subunits
GTP hydrolysis and joining of the 60S ribosomal subunit
Eukaryotic Translation Termination
Regulation of expression of SLITs and ROBOs
Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000078 Abnormality of the genital tract 
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 HP:0000079 Abnormality of the urinary tract 
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 HP:0000175 Cleft palate "Cleft palate is a developmental defect of the `palate` (FMA:54549) resulting from a failure of fusion of the palatine processes." [HPO:curators]
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 HP:0000179 Prominent lower lip "Increased thickness of the lower lip, leading to a prominent appearance of the lower lip." [HPO:curators]
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 HP:0000457 Flat nose 
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 HP:0000823 Delayed puberty 
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 HP:0000980 Pallor 
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 HP:0001155 Abnormality of the hand "An abnormality affecting one or both hands." [HPO:curators]
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 HP:0001199 Triphalangeal thumb "In contrast to the metacarpals 2-5, the first metacarpal is embryologically of phalangeal origin. The thumb normally consists of the first metacarpal and a proximal and distal phalanx. All other digits have an additional middle phalanx. This term applies if the thumb has an accessory phalanx, leading to a digit like appearance of the thumb." [HPO:curators]
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 HP:0001629 Ventricular septal defect "A hole between the two bottom chambers (ventricles) of the heart. The defect is centered around the most superior aspect of the ventricular septum." [HPO:curators]
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 HP:0001895 Normochromic anemia 
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 HP:0001896 Reticulocytopenia 
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 HP:0001972 Macrocytic anemia 
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 HP:0002076 Migraine 
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 HP:0002488 Acute leukemia 
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 HP:0003196 Nasal hypoplasia "Underdevelopment of the `nose` (FMA:46472)." [HPO:probinson]
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 HP:0004322 Decreased body height "A height below that which is expected according to age and gender norms. Although there is no universally accepted definition of short stature, many refer to "short stature" as height more than 2 standard deviations below the mean for age and gender (or below the 3rd percentile for age and gender dependent norms)." [HPO:curators]
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 HP:0011675 Arrhythmia "Any cardiac rhythm other than the normal sinus rhythm. Such a rhythm may be either of sinus or ectopic origin and either regular or irregular. An arrhythmia may be due to a disturbance in impulse formation or conduction or both." [DDD:dbrown, pmid:19063792]
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 HP:0012378 Fatigue "A subjective feeling of tiredness characterized by a lack of energy and motivation." [HPO:probinson]
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 HP:0030270 Elevated red cell adenosine deaminase activity "Increase in the activity of adenosine deaminase (ADA), an enzyme involved in purine metabolism, within erythrocytes. ADA is involved in the catabolism of adenosine." [HPO:probinson, pmid:3348976]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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