ENSDARG00000009830


Danio rerio

Features
Gene ID: ENSDARG00000009830
  
Biological name :hdlbpa
  
Synonyms : hdlbpa / high density lipoprotein binding protein a
  
Possible biological names infered from orthology : 4921511C20Rik / Gm382 / HDLBP / high density lipoprotein binding protein / Mus musculus high density lipoprotein (HDL) binding protein (Hdlbp), transcript variant 3, mRNA. / Q00341 / Q8VDJ3 / RIKEN cDNA 4921511C20 gene
  
Species: Danio rerio
  
Chr. number: 6
Strand: -1
Band:
Gene start: 26874839
Gene end: 26895750
  
Corresponding Affymetrix probe sets: Dr.1000.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000117710
Ensembl peptide - ENSDARP00000017412
NCBI entrez gene - 794178     See in Manteia.
RefSeq - NM_201474
RefSeq - XM_005165938
RefSeq - XM_005165939
RefSeq Peptide - NP_958882
swissprot - F1R9Y8
swissprot - E9QDS1
ZFIN ID - ZDB-GENE-030131-2032
Ensembl - ENSDARG00000009830
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 HDLBPENSGALG00000005823Gallus gallus
 HDLBPENSG00000115677Homo sapiens
 4921511C20RikENSMUSG00000049815Mus musculus
 Gm382ENSMUSG00000062791Mus musculus
 HdlbpENSMUSG00000034088Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
hdlbpb / high density lipoprotein binding protein bENSDARG0000006186470


Protein motifs (from Interpro)
Interpro ID Name
 IPR004087  K Homology domain
 IPR004088  K Homology domain, type 1
 IPR015946  K homology domain-like, alpha/beta


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0071391 cellular response to estrogen stimulus IDA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
HDL clearance


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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