ENSDARG00000010266


Danio rerio

Features
Gene ID: ENSDARG00000010266
  
Biological name :igf2bp3
  
Synonyms : igf2bp3 / insulin-like growth factor 2 mRNA binding protein 3 / Q9PW80
  
Possible biological names infered from orthology : O00425 / Q9CPN8
  
Species: Danio rerio
  
Chr. number: 19
Strand: 1
Band:
Gene start: 20201254
Gene end: 20247336
  
Corresponding Affymetrix probe sets: Dr.25324.1.A1_at (Zebrafish Array)   Dr.8280.1.S1_at (Zebrafish Array)   Dr.8280.1.S2_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000010878
Ensembl peptide - ENSDARP00000140941
Ensembl peptide - ENSDARP00000118332
NCBI entrez gene - 30967     See in Manteia.
swissprot - E9QJD2
swissprot - B2GT58
swissprot - A0A0R4IYT0
swissprot - Q9PW80
ZFIN ID - ZDB-GENE-000308-1
Ensembl - ENSDARG00000010266
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q5ZLP8ENSGALG00000010961Gallus gallus
 O00425ENSG00000136231Homo sapiens
 Q9CPN8ENSMUSG00000029814Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
igf2bp1 / insulin-like growth factor 2 mRNA binding protein 1 / O88477* / Q9NZI8*ENSDARG0000006147871
igf2bp2a / insulin-like growth factor 2 mRNA binding protein 2a / Q9Y6M1* / Q5SF07* / IGF2BP2* / insulin like growth factor 2 mRNA binding protein 2*ENSDARG0000000342168
igf2bp2b / insulin-like growth factor 2 mRNA binding protein 2b / Q9Y6M1* / Q5SF07* / IGF2BP2* / insulin like growth factor 2 mRNA binding protein 2*ENSDARG0000009975847


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR004087  K Homology domain
 IPR004088  K Homology domain, type 1
 IPR034844  IGF2BP3, RNA recognition motif 2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006417 regulation of translation IEA
 biological_processGO:0051028 mRNA transport IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0003730 mRNA 3"-UTR binding ISS


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr